RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 SLC26A11Q86WA9 606 aa25.05■■□□□ 1.6
TMEM260-207ENST00000555497 COLGALT1Q8NBJ5 622 aa25.05■■□□□ 1.6
TMEM260-207ENST00000555497 SMARCD1Q96GM5 515 aa25.05■■□□□ 1.6
TMEM260-207ENST00000555497 CSNK1G1Q9HCP0 422 aa25.05■■□□□ 1.6
TMEM260-207ENST00000555497 FBXW11Q9UKB1 542 aa25.05■■□□□ 1.6
TMEM260-207ENST00000555497 ABT1Q9ULW3 272 aaKnown RBP25.05■■□□□ 1.6
TMEM260-207ENST00000555497 INPP5FQ9Y2H2 1132 aa25.05■■□□□ 1.6
TMEM260-207ENST00000555497 PCSK1P29120 753 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 WASHC5Q12768 1159 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 FAM171BQ6P995 826 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 BZW1Q7L1Q6 419 aaKnown RBP25.04■■□□□ 1.6
TMEM260-207ENST00000555497 CCDC63Q8NA47 563 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 ZNF75CPQ92670 426 aaPredicted RBP25.04■■□□□ 1.6
TMEM260-207ENST00000555497 SLC9A7Q96T83 725 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 WDR91A4D1P6 747 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 TMEM88BA6NKF7 163 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 TRDMT1O14717 391 aaKnown RBP25.04■■□□□ 1.6
TMEM260-207ENST00000555497 ITGB1P05556 798 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 BDNFP23560 247 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 GALNTL6Q49A17 601 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 LRRTM3Q86VH5 581 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 LRRC6Q86X45 466 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 ECHDC2Q86YB7 292 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 LRRC8CQ8TDW0 803 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 NTAN1Q96AB6 310 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 ALKBH8Q96BT7 664 aaKnown RBP25.04■■□□□ 1.6
TMEM260-207ENST00000555497 GRAMD1AQ96CP6 724 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 PRDM16Q9HAZ2 1276 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 DDIT4Q9NX09 232 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 STARD13Q9Y3M8 1113 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 SNX10Q9Y5X0 201 aa25.04■■□□□ 1.6
TMEM260-207ENST00000555497 EDF1O60869 148 aaKnown RBP25.03■■□□□ 1.6
TMEM260-207ENST00000555497 PYGBP11216 843 aa25.03■■□□□ 1.6
TMEM260-207ENST00000555497 ODC1P11926 461 aa25.03■■□□□ 1.6
TMEM260-207ENST00000555497 PRKAR2AP13861 404 aaKnown RBP25.03■■□□□ 1.6
TMEM260-207ENST00000555497 ERCC2P18074 760 aa25.03■■□□□ 1.6
TMEM260-207ENST00000555497 GLUD2P49448 558 aa25.03■■□□□ 1.6
TMEM260-207ENST00000555497 SLC18A2Q05940 514 aa25.03■■□□□ 1.6
TMEM260-207ENST00000555497 TRIM71Q2Q1W2 868 aaKnown RBP25.03■■□□□ 1.6
TMEM260-207ENST00000555497 FITM2Q8N6M3 262 aa25.03■■□□□ 1.6
TMEM260-207ENST00000555497 PDCD7Q8N8D1 485 aaKnown RBP25.03■■□□□ 1.6
TMEM260-207ENST00000555497 ANKLE1Q8NAG6 615 aa25.03■■□□□ 1.6
TMEM260-207ENST00000555497 CCNYQ8ND76 341 aa25.03■■□□□ 1.6
TMEM260-207ENST00000555497 PKMYT1Q99640 499 aa25.03■■□□□ 1.6
TMEM260-207ENST00000555497 SLC40A1Q9NP59 571 aa25.03■■□□□ 1.6
TMEM260-207ENST00000555497 HAUS2Q9NVX0 235 aa25.03■■□□□ 1.6
TMEM260-207ENST00000555497 SEPT10Q9P0V9 454 aa25.03■■□□□ 1.6
TMEM260-207ENST00000555497 SF3B1O75533 1304 aaKnown RBP eCLIP25.03■■□□□ 1.69e-6■■■■■ 68.9
TMEM260-207ENST00000555497 CSH1P0DML2 217 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 CSH2P0DML3 217 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 RAB27AP51159 221 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 NEK3P51956 506 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 SCAPQ12770 1279 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 PDK1Q15118 436 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 OR10T2Q8NGX3 314 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 XAB2Q9HCS7 855 aaKnown RBP25.02■■□□□ 1.6
TMEM260-207ENST00000555497 PIH1D1Q9NWS0 290 aaKnown RBP25.02■■□□□ 1.6
TMEM260-207ENST00000555497 TRIM49D1C9J1S8 452 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 TM9SF1O15321 606 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 RASSF9O75901 435 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 DNAJC8O75937 253 aaPredicted RBP25.02■■□□□ 1.6
TMEM260-207ENST00000555497 GSTA1P08263 222 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 FDFT1P37268 417 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 CRADDP78560 199 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 INTS6LQ5JSJ4 861 aaKnown RBP25.02■■□□□ 1.6
TMEM260-207ENST00000555497 ZNF567Q8N184 647 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 PGAP3Q96FM1 320 aaPredicted RBP25.02■■□□□ 1.6
TMEM260-207ENST00000555497 ACBD6Q9BR61 282 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 NUP205Q92621 2012 aa25.02■■□□□ 1.6
TMEM260-207ENST00000555497 LPXNO60711 386 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 CYP11A1P05108 521 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 PSMB4P28070 264 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 TTC39BQ5VTQ0 682 aaPredicted RBP25.01■■□□□ 1.59
TMEM260-207ENST00000555497 RNF43Q68DV7 783 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 COLEC11Q9BWP8 271 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 ALG13Q9NP73 1137 aaKnown RBP25.01■■□□□ 1.59
TMEM260-207ENST00000555497 RNF186Q9NXI6 227 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 HGSO14964 777 aaPredicted RBP25.01■■□□□ 1.59
TMEM260-207ENST00000555497 GSTA2P09210 222 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 YY1P25490 414 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 UNC5BQ8IZJ1 945 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 GSDMBQ8TAX9 411 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 OXNAD1Q96HP4 312 aaPredicted RBP25.01■■□□□ 1.59
TMEM260-207ENST00000555497 APOPT1Q96IL0 206 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 KLHL14Q9P2G3 628 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 ZNF180Q9UJW8 692 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 PCDHA11Q9Y5I1 949 aa25.01■■□□□ 1.59
TMEM260-207ENST00000555497 WDR27A2RRH5 827 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 FAM159BA6NKW6 160 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 M0QZQ0 153 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 OPHN1O60890 802 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 RPLP2P05387 115 aaKnown RBP25■■□□□ 1.59
TMEM260-207ENST00000555497 ETV4P43268 484 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 OTOAQ7RTW8 1153 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 NPWQ8N729 165 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 RSPH1Q8WYR4 309 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 PTPRN2Q92932 1015 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 KCNK1O00180 336 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 HNRNPH1P31943 449 aaKnown RBP25■■□□□ 1.59
TMEM260-207ENST00000555497 AIF1P55008 147 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms