RNA–Protein interactions for RNA: ENST00000555371.1

NFKBIA-204, Transcript of NFKB inhibitor alpha, humanhuman

TSL 3

Gene NFKBIA, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-204ENST00000555371 CETN3O15182 167 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 TRIM49P0CI25 452 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 TRIM49CP0CI26 452 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 EPB41P11171 864 aaKnown RBP11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 PSMC2P35998 433 aaKnown RBP11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 PPP1R2P41236 205 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 VAMP7P51809 220 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 TNNC1P63316 161 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 DLG4P78352 724 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 ILKQ13418 452 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 STARD3Q14849 445 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 EDRF1Q3B7T1 1238 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 ARL13BQ3SXY8 428 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 ZCWPW2Q504Y3 356 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 CRYBG3Q68DQ2 2970 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 SCARA3Q6AZY7 606 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 CLEC17AQ6ZS10 378 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 USP53Q70EK8 1073 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 PLEKHO2Q8TD55 490 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 TRMT2BQ96GJ1 504 aaKnown RBP11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 ELF4Q99607 663 aaPredicted RBP11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 NUP62CLQ9H1M0 184 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 CLSTN2Q9H4D0 955 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 ITM2CQ9NQX7 267 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 DNAJC17Q9NVM6 304 aaKnown RBP11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 CKAP5Q14008 2032 aa11.19□□□□□ -0.62
NFKBIA-204ENST00000555371 PRRT4C9JH25 899 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 CSO75390 466 aaKnown RBP11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 FSBPO95073 299 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 CYP11A1P05108 521 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 ACADMP11310 421 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 CKMT2P17540 419 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 CYP2F1P24903 491 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 OXTRP30559 389 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 PIK3CAP42336 1068 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 LSSP48449 732 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 PDE6CP51160 858 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 AP3M2P53677 418 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 PMS1P54277 932 aaKnown RBP11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 MYL6P60660 151 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 LRRC63Q05C16 580 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 CLN3Q13286 438 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 MORC3Q14149 939 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 NCAPHQ15003 741 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 SHBQ15464 509 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 NFIL3Q16649 462 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 COBLL1Q53SF7 1204 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 DCAF17Q5H9S7 520 aaPredicted RBP11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 TCERG1LQ5VWI1 586 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 TDRD10Q5VZ19 366 aaKnown RBP11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 ANKRD40Q6AI12 368 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 INTS8Q75QN2 995 aaKnown RBP11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 SCN4BQ8IWT1 228 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 DCP1BQ8IZD4 617 aaKnown RBP11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 ADGRF2Q8IZF7 708 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 CACTIN-AS1Q8N1I8 211 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 PDCL2Q8N4E4 241 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 TMC2Q8TDI7 906 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 SAP25Q8TEE9 199 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 PARD3BQ8TEW8 1205 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 NELFBQ8WX92 580 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 ZNF516Q92618 1163 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 SIPA1Q96FS4 1042 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 DHTKD1Q96HY7 919 aaPredicted RBP11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 MYRFLQ96LU7 910 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 CCNL2Q96S94 520 aaPredicted RBP11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 NUP58Q9BVL2 599 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 LMBRD1Q9NUN5 540 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 KIAA1468Q9P260 1216 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 L1RE1Q9UN81 338 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 SATB2Q9UPW6 733 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 PLAAQ9Y263 795 aa11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.18□□□□□ -0.62
NFKBIA-204ENST00000555371 CSMD1Q96PZ7 3565 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 CELSR2Q9HCU4 2923 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 PCNX1Q96RV3 2341 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 BICDL2A1A5D9 508 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 DFNA5O60443 496 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 ABL1P00519 1130 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 CST3P01034 146 aaPredicted RBP11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 SFTPCP11686 197 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 CD44P16070 742 aaKnown RBP11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 ACAT1P24752 427 aaKnown RBP11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 RBMS1P29558 406 aaKnown RBP11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 GCLMP48507 274 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 STX17P56962 302 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 FKBP3Q00688 224 aaKnown RBP11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 TSPY1Q01534 308 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 SMARCB1Q12824 385 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 PAK1Q13153 545 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 SRSF6Q13247 344 aaKnown RBP11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 ORC1Q13415 861 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 NCOA4Q13772 614 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 CCDC142Q17RM4 750 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 ZNF699Q32M78 642 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 WDR72Q3MJ13 1102 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 CCDC40Q4G0X9 1142 aa11.17□□□□□ -0.62
NFKBIA-204ENST00000555371 FOXR1Q6PIV2 292 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms