RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TNFAIP3P21580 790 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 MMP8P22894 467 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 HOXD9P28356 352 aaPredicted RBP12.55□□□□□ -0.4
SRP54-206ENST00000555317 FNTBP49356 437 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 DGKEP52429 567 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 CENPCQ03188 943 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 MESP2Q0VG99 397 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 CDH18Q13634 790 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 C2CD6Q53TS8 623 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 RABGAP1LQ5R372 815 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 SFTPA1Q8IWL2 248 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 CHPFQ8IZ52 775 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 BAP1Q92560 729 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 SLC39A13Q96H72 371 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 PHOX2BQ99453 314 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 HINFPQ9BQA5 517 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 NUCKS1Q9H1E3 243 aaKnown RBP12.55□□□□□ -0.4
SRP54-206ENST00000555317 POLMQ9NP87 494 aaPredicted RBP12.55□□□□□ -0.4
SRP54-206ENST00000555317 METTL5Q9NRN9 209 aaKnown RBP12.55□□□□□ -0.4
SRP54-206ENST00000555317 C2orf42Q9NWW7 574 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 STIM2Q9P246 746 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 BCCIPQ9P287 314 aaKnown RBP eCLIP12.55□□□□□ -0.4
SRP54-206ENST00000555317 SLC27A6Q9Y2P4 619 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 GOLGA6L7A0A1B0GV03 622 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 KCNU1A8MYU2 1149 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 PROB1E7EW31 1015 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 GFRA3O60609 400 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 LMNAP02545 664 aaKnown RBP12.54□□□□□ -0.4
SRP54-206ENST00000555317 CISD3P0C7P0 127 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 HOXA6P31267 233 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 SLC6A4P31645 630 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 CNR2P34972 360 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 KIR2DL1P43626 348 aaPredicted RBP12.54□□□□□ -0.4
SRP54-206ENST00000555317 MRE11P49959 708 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 PITX1P78337 314 aaPredicted RBP12.54□□□□□ -0.4
SRP54-206ENST00000555317 DEUP1Q05D60 604 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 KLHL30Q0D2K2 578 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 EIF4HQ15056 248 aaKnown RBP12.54□□□□□ -0.4
SRP54-206ENST00000555317 SLC25A52Q3SY17 297 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 FAM133BQ5BKY9 247 aaKnown RBP12.54□□□□□ -0.4
SRP54-206ENST00000555317 FIGNQ5HY92 759 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 MPP7Q5T2T1 576 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 PIK3R6Q5UE93 754 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 RAP1GAP2Q684P5 730 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 PRR23BQ6ZRT6 265 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 CEP68Q76N32 757 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 ALYREFQ86V81 257 aaKnown RBP12.54□□□□□ -0.4
SRP54-206ENST00000555317 VPS36Q86VN1 386 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 MFN1Q8IWA4 741 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 LGI2Q8N0V4 545 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 IL17RCQ8NAC3 791 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 ZBTB44Q8NCP5 570 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 RNF214Q8ND24 703 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 WFIKKN2Q8TEU8 576 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 SELENOOQ9BVL4 669 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 CIPCQ9C0C6 399 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 STARD13Q9Y3M8 1113 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 GVINP1Q7Z2Y8 2422 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 SDK1Q7Z5N4 2213 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 USP34Q70CQ2 3546 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 GPR179Q6PRD1 2367 aa12.54□□□□□ -0.4
SRP54-206ENST00000555317 ZNF292O60281 2723 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 CCDC163A0A0D9SF12 145 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 A0A1W2PQJ5 194 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 H0Y626 953 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 NPC1O15118 1278 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 AXIN1O15169 862 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 TPM1P09493 284 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 KRT3P12035 628 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 UNGP13051 313 aaPredicted RBP12.53□□□□□ -0.4
SRP54-206ENST00000555317 HOXB2P14652 356 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 TACR2P21452 398 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 NTSR1P30989 418 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 SDC4P31431 198 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 PXNP49023 591 aaPredicted RBP12.53□□□□□ -0.4
SRP54-206ENST00000555317 DMWDQ09019 674 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 STARD3Q14849 445 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 CRY1Q16526 586 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 TDRD12Q587J7 1177 aaKnown RBP12.53□□□□□ -0.4
SRP54-206ENST00000555317 MS4A13Q5J8X5 152 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 BRMS1LQ5PSV4 323 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 EMC10Q5UCC4 262 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 TTC39BQ5VTQ0 682 aaPredicted RBP12.53□□□□□ -0.4
SRP54-206ENST00000555317 EGFLAMQ63HQ2 1017 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 NADSYN1Q6IA69 706 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 ANO7Q6IWH7 933 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 DNAJC24Q6P3W2 148 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 ARCQ7LC44 396 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 IRF2BP2Q7Z5L9 587 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 PHLDB2Q86SQ0 1253 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 WDR5BQ86VZ2 330 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 PHF13Q86YI8 300 aaPredicted RBP12.53□□□□□ -0.4
SRP54-206ENST00000555317 AHI1Q8N157 1196 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 PGBD3Q8N328 593 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 CARNMT1Q8N4J0 409 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 NELL1Q92832 810 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 PCDHB18PQ96TA0 734 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 TBCBQ99426 244 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 NPY6RQ99463 290 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 XPO4Q9C0E2 1151 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms