RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 SMG1Q96Q15 3661 aaKnown RBP13.69□□□□□ -0.22
XRCC3-212ENST00000555231 DNTTP04053 509 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 KRT13P13646 458 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 GRK6P43250 576 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 SGSHP51688 502 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 RAD23BP54727 409 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 CLDN6P56747 220 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 TRIP4Q15650 581 aaPredicted RBP13.69□□□□□ -0.22
XRCC3-212ENST00000555231 PTPRNQ16849 979 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 PRAMEF14Q5SWL7 426 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 INTS8Q75QN2 995 aaKnown RBP13.69□□□□□ -0.22
XRCC3-212ENST00000555231 BHLHA9Q7RTU4 235 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 ADAT2Q7Z6V5 191 aaKnown RBP13.69□□□□□ -0.22
XRCC3-212ENST00000555231 ADIPOR2Q86V24 386 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 FAM186BQ8IYM0 893 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 WFDC5Q8TCV5 224 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 WFIKKN2Q8TEU8 576 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 EDEM1Q92611 657 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 IGSF8Q969P0 613 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 TMEM176AQ96HP8 235 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 DNAI2Q9GZS0 605 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 CISHQ9NSE2 258 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 PLA2G4CQ9UP65 541 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 TRAF3IP3Q9Y228 551 aa13.69□□□□□ -0.22
XRCC3-212ENST00000555231 A0A1B0GVL5 298 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 FAM47DPA6NHR8 397 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 CBX4O00257 560 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 PLK4O00444 970 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 MAPK13O15264 365 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 ZBED1O96006 694 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 F13A1P00488 732 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 PABPC1P11940 636 aaKnown RBP13.68□□□□□ -0.22
XRCC3-212ENST00000555231 CD27P26842 260 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 CTSKP43235 329 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 HARS2P49590 506 aaKnown RBP13.68□□□□□ -0.22
XRCC3-212ENST00000555231 PDE4CQ08493 712 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 SMAD1Q15797 465 aaKnown RBP13.68□□□□□ -0.22
XRCC3-212ENST00000555231 GOLGA7BQ2TAP0 167 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 MBLAC2Q68D91 279 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 ARHGAP17Q68EM7 881 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 GATAD2AQ86YP4 633 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
XRCC3-212ENST00000555231 ANKRD52Q8NB46 1076 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 TATDN2Q93075 761 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 TMA16Q96EY4 203 aaKnown RBP13.68□□□□□ -0.22
XRCC3-212ENST00000555231 ORAI3Q9BRQ5 295 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 UBXN6Q9BZV1 441 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 TMEM8AQ9HCN3 771 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 OSGEPQ9NPF4 335 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 FTSJ1Q9UET6 329 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 GGA2Q9UJY4 613 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 MYLKQ15746 1914 aa13.68□□□□□ -0.22
XRCC3-212ENST00000555231 GCN1Q92616 2671 aaKnown RBP13.67□□□□□ -0.22
XRCC3-212ENST00000555231 GOLGA6L7A0A1B0GV03 622 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 MSI1O43347 362 aaKnown RBP13.67□□□□□ -0.22
XRCC3-212ENST00000555231 PCDHGA12O60330 932 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 PRB1P04280 392 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 IGHV4-34P06331 123 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 ZSCAN22P10073 491 aaPredicted RBP13.67□□□□□ -0.22
XRCC3-212ENST00000555231 CD70P32970 193 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 PSMC2P35998 433 aaKnown RBP13.67□□□□□ -0.22
XRCC3-212ENST00000555231 BCAT1P54687 386 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 ADIGQ0VDE8 80 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 TTC31Q49AM3 519 aaPredicted RBP13.67□□□□□ -0.22
XRCC3-212ENST00000555231 KRT39Q6A163 491 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 PM20D1Q6GTS8 502 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 SCUBE3Q8IX30 993 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 AHI1Q8N157 1196 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.67□□□□□ -0.22
XRCC3-212ENST00000555231 PIP4K2CQ8TBX8 421 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 GANCQ8TET4 914 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 RNF139Q8WU17 664 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 SLC6A18Q96N87 628 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 LRRC4Q9HBW1 653 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 SGK2Q9HBY8 427 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 OLA1Q9NTK5 396 aaKnown RBP13.67□□□□□ -0.22
XRCC3-212ENST00000555231 TSPAN16Q9UKR8 245 aa13.67□□□□□ -0.22
XRCC3-212ENST00000555231 HBS1LQ9Y450 684 aaKnown RBP13.67□□□□□ -0.22
XRCC3-212ENST00000555231 NYNRINQ9P2P1 1898 aaKnown RBP13.66□□□□□ -0.22
XRCC3-212ENST00000555231 KNTC1P50748 2209 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 A0A087WV48 116 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 YJEFN3A6XGL0 299 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 E7ENQ6 273 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 TBL1XO60907 577 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 DLDP09622 509 aaKnown RBP13.66□□□□□ -0.22
XRCC3-212ENST00000555231 PFKFB1P16118 471 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 POLR2EP19388 210 aaKnown RBP13.66□□□□□ -0.22
XRCC3-212ENST00000555231 ITPKBP27987 946 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 ABCG1P45844 678 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 C21orf59P57076 290 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 SLC8A3P57103 927 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 DNM1Q05193 864 aaKnown RBP13.66□□□□□ -0.22
XRCC3-212ENST00000555231 ADAM9Q13443 819 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 ADGRF1Q5T601 910 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 BSPRYQ5W0U4 402 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 ZNF776Q68DI1 518 aaPredicted RBP13.66□□□□□ -0.22
XRCC3-212ENST00000555231 KIAA0895LQ68EN5 471 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 RFWD3Q6PCD5 774 aa13.66□□□□□ -0.22
XRCC3-212ENST00000555231 KIAA0907Q7Z7F0 614 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms