RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 MTA1Q13330 715 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 EARS2Q5JPH6 523 aaKnown RBP4.56□□□□□ -1.68
SCFD1-214ENST00000554819 PXDC1Q5TGL8 231 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 ANKRD40Q6AI12 368 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 DEF8Q6ZN54 512 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 RBM44Q6ZP01 1051 aaKnown RBP4.56□□□□□ -1.68
SCFD1-214ENST00000554819 OR4N4Q8N0Y3 316 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 ENAHQ8N8S7 591 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-214ENST00000554819 ADPRHL1Q8NDY3 354 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 POF1BQ8WVV4 589 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 LTV1Q96GA3 475 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-214ENST00000554819 SIGLEC11Q96RL6 698 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 TMEM79Q9BSE2 394 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 KATNAL1Q9BW62 490 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 TM2D2Q9BX73 214 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 CCDC134Q9H6E4 229 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 ERVK-5Q9HDB9 667 aa4.56□□□□□ -1.68
SCFD1-214ENST00000554819 ARHGEF17Q96PE2 2063 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-214ENST00000554819 EMSYQ7Z589 1322 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 C3orf70A6NLC5 250 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-214ENST00000554819 INO80B-WBP1J3KQ70 363 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 RPP40O75818 363 aaKnown RBP4.55□□□□□ -1.68
SCFD1-214ENST00000554819 CSTBP04080 98 aaKnown RBP4.55□□□□□ -1.68
SCFD1-214ENST00000554819 AKR1A1P14550 325 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 TFEBP19484 476 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 PDIA3P30101 505 aaKnown RBP4.55□□□□□ -1.68
SCFD1-214ENST00000554819 IDUAP35475 653 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 SERPINF1P36955 418 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 PLCD1P51178 756 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 RBM6P78332 1123 aaKnown RBP4.55□□□□□ -1.68
SCFD1-214ENST00000554819 CFHR1Q03591 330 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 TLE3Q04726 772 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 ZNF91Q05481 1191 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 DMWDQ09019 674 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 BLMHQ13867 455 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 KRT72Q14CN4 511 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 ANXA2RQ3ZCQ2 193 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 TRIM60Q495X7 471 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 TMEM88Q6PEY1 159 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 KLHL17Q6TDP4 642 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 TFAP2DQ7Z6R9 452 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 RFX6Q8HWS3 928 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 CCDC117Q8IWD4 279 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-214ENST00000554819 ATG16L2Q8NAA4 619 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 VPS37AQ8NEZ2 397 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 RPS6KC1Q96S38 1066 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 RMDN3Q96TC7 470 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 RTKNQ9BST9 563 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 VPS16Q9H269 839 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 SFXN1Q9H9B4 322 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 DACT1Q9NYF0 836 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 LRFN1Q9P244 771 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 IPO11Q9UI26 975 aaKnown RBP4.55□□□□□ -1.68
SCFD1-214ENST00000554819 B3GNT3Q9Y2A9 372 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 ZBTB1Q9Y2K1 713 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 COMMD10Q9Y6G5 202 aa4.55□□□□□ -1.68
SCFD1-214ENST00000554819 SETD1BQ9UPS6 1966 aaKnown RBP4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TBC1D3DA0A087WVF3 549 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TBC1D3IA0A087WXS9 549 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TBC1D3EA0A087X179 549 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TBC1D3KA0A087X1G2 549 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TBC1D3BA6NDS4 549 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TBC1D3FA6NER0 549 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TBC1D3LB9A6J9 549 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TNFRSF6BO95407 300 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 FGBP02675 491 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 ALDOAP04075 364 aaKnown RBP4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TBC1D3HP0C7X1 549 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 CTSAP10619 480 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 HOXA7P31268 230 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-214ENST00000554819 GRK5P34947 590 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 CPA2P48052 419 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 CDK7P50613 346 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 GALNT1Q10472 559 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-214ENST00000554819 KLF9Q13886 244 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-214ENST00000554819 Q4G0T1 1027 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 CCDC38Q502W7 563 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TBC1D3GQ6DHY5 549 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TBC1D3CQ6IPX1 549 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 ZNF425Q6IV72 752 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 C11orf87Q6NUJ2 197 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 DHRS13Q6UX07 377 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 SLC39A5Q6ZMH5 540 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 C1QL2Q7Z5L3 287 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 MRPL10Q7Z7H8 261 aaKnown RBP4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TBC1D3Q8IZP1 549 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-214ENST00000554819 FAM47BQ8NA70 645 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 C16orf52Q8NHV5 167 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 HMGB4Q8WW32 186 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 COQ8BQ96D53 544 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 MCRS1Q96EZ8 462 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 ZNF778Q96MU6 729 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 GPR78Q96P69 363 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 GATA5Q9BWX5 397 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-214ENST00000554819 LIN7CQ9NUP9 197 aaKnown RBP4.54□□□□□ -1.68
SCFD1-214ENST00000554819 TRNAU1APQ9NX07 287 aaKnown RBP4.54□□□□□ -1.68
SCFD1-214ENST00000554819 RNF7Q9UBF6 113 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 SLC12A4Q9UP95 1085 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 CNTN6Q9UQ52 1028 aa4.54□□□□□ -1.68
SCFD1-214ENST00000554819 KIF28PB7ZC32 967 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms