RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 F9P00740 461 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 CHRM1P11229 460 aaPredicted RBP13.73□□□□□ -0.21
APEX1-208ENST00000554813 HNRNPLP14866 589 aaKnown RBP eCLIP13.73□□□□□ -0.21
APEX1-208ENST00000554813 MMP8P22894 467 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 HOXC13P31276 330 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 SLC6A4P31645 630 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 NSFP46459 744 aaKnown RBP13.73□□□□□ -0.21
APEX1-208ENST00000554813 PITX1P78337 314 aaPredicted RBP13.73□□□□□ -0.21
APEX1-208ENST00000554813 FANCCQ00597 558 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 NME3Q13232 169 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 EIF4EBP2Q13542 120 aaPredicted RBP13.73□□□□□ -0.21
APEX1-208ENST00000554813 EIF4HQ15056 248 aaKnown RBP13.73□□□□□ -0.21
APEX1-208ENST00000554813 TMEM92Q6UXU6 159 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 CEP68Q76N32 757 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 SND1Q7KZF4 910 aaKnown RBP eCLIP13.73□□□□□ -0.21
APEX1-208ENST00000554813 ANKS1BQ7Z6G8 1248 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 HJURPQ8NCD3 748 aaPredicted RBP13.73□□□□□ -0.21
APEX1-208ENST00000554813 GAB3Q8WWW8 586 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 RUBCNQ92622 972 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 AGPAT1Q99943 283 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 EDEM3Q9BZQ6 932 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 ZDHHC4Q9NPG8 344 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 SEPT11Q9NVA2 429 aaKnown RBP13.73□□□□□ -0.21
APEX1-208ENST00000554813 COX16Q9P0S2 106 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 CLEC4EQ9ULY5 219 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 KIAA1549LQ6ZVL6 1849 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 FAM170AA1A519 330 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 GOLGA8SH3BPF8 625 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 ADAM23O75077 832 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 RPP40O75818 363 aaKnown RBP13.72□□□□□ -0.21
APEX1-208ENST00000554813 UNGP13051 313 aaPredicted RBP13.72□□□□□ -0.21
APEX1-208ENST00000554813 UBASH3AP57075 661 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 GEN1Q17RS7 908 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 SLC25A52Q3SY17 297 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 USP39Q53GS9 565 aaKnown RBP13.72□□□□□ -0.21
APEX1-208ENST00000554813 C2CD6Q53TS8 623 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 MS4A13Q5J8X5 152 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 EGFLAMQ63HQ2 1017 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 NADSYN1Q6IA69 706 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 ANO7Q6IWH7 933 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 MMS22LQ6ZRQ5 1243 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 PRR23BQ6ZRT6 265 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 ARCQ7LC44 396 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 RASSF3Q86WH2 238 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 SLC30A5Q8TAD4 765 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 WFIKKN2Q8TEU8 576 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 NT5C3BQ969T7 300 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 NPY6RQ99463 290 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 HINFPQ9BQA5 517 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 NUP58Q9BVL2 599 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 NUCKS1Q9H1E3 243 aaKnown RBP13.72□□□□□ -0.21
APEX1-208ENST00000554813 ELOVL2Q9NXB9 296 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 STIM2Q9P246 746 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 NCDNQ9UBB6 729 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 HCN2Q9UL51 889 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 SMG5Q9UPR3 1016 aaKnown RBP13.72□□□□□ -0.21
APEX1-208ENST00000554813 PAXBP1Q9Y5B6 917 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 PIEZO1Q92508 2521 aa13.72□□□□□ -0.21
APEX1-208ENST00000554813 F5H5T6 163 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 HOXB2P14652 356 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 TACR2P21452 398 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 TNFAIP3P21580 790 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 WASP42768 502 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 SULT1E1P49888 294 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 SGSHP51688 502 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 CENPCQ03188 943 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 SRSF5Q13243 272 aaKnown RBP13.71□□□□□ -0.21
APEX1-208ENST00000554813 CLEC16AQ2KHT3 1053 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 RAP1GAP2Q684P5 730 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 LAIR1Q6GTX8 287 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 IRF2BP2Q7Z5L9 587 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 CHSY1Q86X52 802 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 LGI2Q8N0V4 545 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 PGBD3Q8N328 593 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 FIBINQ8TAL6 211 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 BAP1Q92560 729 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 PGAP3Q96FM1 320 aaPredicted RBP13.71□□□□□ -0.21
APEX1-208ENST00000554813 PCDHB18PQ96TA0 734 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 ACOX2Q99424 681 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 GABRG3Q99928 467 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 CIPCQ9C0C6 399 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 WDCPQ9H6R7 721 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 ABCB8Q9NUT2 735 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 ADAM22Q9P0K1 906 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 BCCIPQ9P287 314 aaKnown RBP eCLIP13.71□□□□□ -0.21
APEX1-208ENST00000554813 THAP10Q9P2Z0 257 aaPredicted RBP13.71□□□□□ -0.21
APEX1-208ENST00000554813 XPO7Q9UIA9 1087 aaKnown RBP13.71□□□□□ -0.21
APEX1-208ENST00000554813 TMEM59LQ9UK28 342 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 GMEB2Q9UKD1 530 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 PLA2G4CQ9UP65 541 aa13.71□□□□□ -0.21
APEX1-208ENST00000554813 TCRBV21S2A2A0A5A6 115 aa13.7□□□□□ -0.22
APEX1-208ENST00000554813 LRRC53A6NM62 1247 aa13.7□□□□□ -0.22
APEX1-208ENST00000554813 CALB1P05937 261 aa13.7□□□□□ -0.22
APEX1-208ENST00000554813 ATP5BP06576 529 aaKnown RBP13.7□□□□□ -0.22
APEX1-208ENST00000554813 PABPC1P11940 636 aaKnown RBP13.7□□□□□ -0.22
APEX1-208ENST00000554813 HLA-FP30511 346 aa13.7□□□□□ -0.22
APEX1-208ENST00000554813 CXCR3P49682 368 aa13.7□□□□□ -0.22
APEX1-208ENST00000554813 RPS24P62847 133 aaKnown RBP13.7□□□□□ -0.22
APEX1-208ENST00000554813 DEUP1Q05D60 604 aa13.7□□□□□ -0.22
APEX1-208ENST00000554813 CDH18Q13634 790 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms