RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 AQP12BA6NM10 295 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 AGPSO00116 658 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 PSMD9O00233 223 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SYT5O00445 386 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 TNRC18O15417 2968 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 PIP5K1CO60331 668 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 VNN1O95497 513 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 CELA2AP08217 269 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SRGAP2BP0DMP2 458 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 ARP10275 920 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 CD19P15391 556 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 DRD4P21917 467 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 MST1P26927 711 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 NTSR1P30989 418 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 LIPAP38571 399 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 GRK6P43250 576 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 MTHFSP49914 203 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 TIRAPP58753 221 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 TIAL1Q01085 375 aaKnown RBP eCLIP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 NSUN2Q08J23 767 aaKnown RBP eCLIP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 GALNT1Q10472 559 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 GPS1Q13098 491 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 ATP1A4Q13733 1029 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 BMPR2Q13873 1038 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 TREML2Q5T2D2 321 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 ZNF618Q5T7W0 954 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SLC9A4Q6AI14 798 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 FCRLBQ6BAA4 426 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 ABLIM2Q6H8Q1 611 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 CLEC9AQ6UXN8 241 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 MAVSQ7Z434 540 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 C1QL2Q7Z5L3 287 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 GRASPQ7Z6J2 395 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 CAND1Q86VP6 1230 aaKnown RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 CACNA2D3Q8IZS8 1091 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 NKAPQ8N5F7 415 aaKnown RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 C11orf44Q8N8P7 122 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SPATA5Q8NB90 893 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 MBD3L2Q8NHZ7 208 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 FAM71BQ8TC56 605 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 ABHD5Q8WTS1 349 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 STYXQ8WUJ0 223 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 GRAMD1AQ96CP6 724 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 R3HDM4Q96D70 268 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 REPS1Q96D71 796 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 PRPF18Q99633 342 aaKnown RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 VN1R3Q9BXE9 311 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 AGO4Q9HCK5 861 aaKnown RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 DACT1Q9NYF0 836 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 EHD3Q9NZN3 535 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 VPS51Q9UID3 782 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SH2B3Q9UQQ2 575 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 DRG1Q9Y295 367 aaKnown RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 DTNAQ9Y4J8 743 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 NINLQ9Y2I6 1382 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 PDE4DIPQ5VU43 2346 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 PXDNQ92626 1479 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 AKAP12Q02952 1782 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 NPHP3Q7Z494 1330 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 DCCP43146 1447 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 DLC1Q96QB1 1528 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 WDR90Q96KV7 1748 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 IFT172Q9UG01 1749 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SBF2Q86WG5 1849 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 ADGRL2O95490 1459 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 OR2W5A6NFC9 320 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 EXOC5O00471 708 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 ZSCAN9O15535 394 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 ASNA1O43681 348 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 URI1O94763 535 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 NXPH3O95157 252 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 TNFRSF6BO95407 300 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 NTSR2O95665 410 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 GLP2RO95838 553 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 VIPP01282 170 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 FESP07332 822 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 HNRNPCP07910 306 aaKnown RBP eCLIP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 ITGA5P08648 1049 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 EBLN1P0CF75 366 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 NPPBP16860 134 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 ZFXP17010 805 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 RBL1P28749 1068 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SERPINF1P36955 418 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 CCT8P50990 548 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 CLCN2P51788 898 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 PDE1AP54750 535 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 CLCA4Q14CN2 919 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 ZNF66Q6ZN08 573 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 TTC30AQ86WT1 665 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 GATAD2AQ86YP4 633 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 RAB11FIP4Q86YS3 637 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 RASGRP3Q8IV61 690 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 FSTL5Q8N475 847 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 MYRIPQ8NFW9 859 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SPATA3Q8NHX4 192 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 HASPINQ8TF76 798 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SCARB1Q8WTV0 552 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 TRAPPC12Q8WVT3 735 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 XAGE5Q8WWM1 108 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SOCS4Q8WXH5 440 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms