RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 TEX44Q53QW1 395 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 PPM1JQ5JR12 505 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 ARHGAP17Q68EM7 881 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 UNC93AQ86WB7 457 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 TRIM42Q8IWZ5 723 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 LRRC52Q8N7C0 313 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 TMEM40Q8WWA1 233 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 STMN2Q93045 179 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 MTBPQ96DY7 904 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 SPATA13Q96N96 652 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 DCLRE1BQ9H816 532 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 XPNPEP3Q9NQH7 507 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 SYBUQ9NX95 663 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 SIRPGQ9P1W8 387 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 M0QYT0 321 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 CCNFP41002 786 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 NR2C2P49116 596 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 ZBTB6Q15916 424 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 SPDYAQ5MJ70 313 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 SHCBP1Q8NEM2 672 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 CENPIQ92674 756 aaPredicted RBP16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 MED10Q9BTT4 135 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 C11orf84Q9BUA3 381 aaPredicted RBP16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 TUBB6Q9BUF5 446 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 KCNK4Q9NYG8 393 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 UBQLN1Q9UMX0 589 aaKnown RBP16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 HBS1LQ9Y450 684 aaKnown RBP16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 CAPN9O14815 690 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 KLF11O14901 512 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 GPR32O75388 356 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 CRHR1P34998 444 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 SYPL2Q5VXT5 272 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 MAB21L3Q8N8X9 362 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 RNF139Q8WU17 664 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 C7orf26Q96N11 449 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 SHCBP1LQ9BZQ2 653 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 KATNBL1Q9H079 304 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 WWP1Q9H0M0 922 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 FZD10Q9ULW2 581 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 SDR42E2A6NKP2 422 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 PRR5-ARHGAP8B1AHC4 643 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 HUS1O60921 280 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 ALDOAP04075 364 aaKnown RBP16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 RARBP10826 455 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 MATKP42679 507 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 ARHGAP8P85298 464 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 HFE2Q6ZVN8 426 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 OSTM1Q86WC4 334 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 RASSF3Q86WH2 238 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 ENDOVQ8N8Q3 282 aaKnown RBP16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 RBM15BQ8NDT2 890 aaKnown RBP16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 PRDM12Q9H4Q4 367 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 ZNF358Q9NW07 568 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 TXNDC16Q9P2K2 825 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 DNAJC16Q9Y2G8 782 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 ZSWIM8A7E2V4 1837 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 CCDC78A2IDD5 438 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 SMIM10L2AP0DMW4 78 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 SMIM10L2BP0DMW5 78 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 PACS1Q6VY07 963 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 PID1Q7Z2X4 250 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 RSPH3Q86UC2 560 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 THTPAQ9BU02 230 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 MOCS1Q9NZB8 636 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 PLXNA1Q9UIW2 1896 aa16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 ZNF638Q14966 1978 aaKnown RBP16.14■□□□□ 0.17
ARHGEF40-203ENST00000554514 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 DGKIO75912 1065 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 STK10O94804 968 aaKnown RBP16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 SERPINB9P50453 376 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 PDE1CQ14123 709 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 KRT72Q14CN4 511 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 SLC25A41Q8N5S1 370 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 CDKL2Q92772 493 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 OSBPL1AQ9BXW6 950 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 USP3Q9Y6I4 520 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 TAF6P49848 677 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 MAP3K7CLP57077 242 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 IFRD2Q12894 506 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 HIC1Q14526 733 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 PPP2R5DQ14738 602 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 DUSP28Q4G0W2 176 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 EFHC1Q5JVL4 640 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 CMC1Q7Z7K0 106 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.13■□□□□ 0.171e-7■□□□□ 8.6
ARHGEF40-203ENST00000554514 POU5F2Q8N7G0 328 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 B3GALNT2Q8NCR0 500 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 DNAJC9Q8WXX5 260 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 AZIN2Q96A70 460 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 APOL2Q9BQE5 337 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 LRRC4Q9HBW1 653 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 NMRK1Q9NWW6 199 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 ZFATQ9P243 1243 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 KLHL8Q9P2G9 620 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 DERAQ9Y315 318 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 MRPL42Q9Y6G3 142 aaKnown RBP16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 RPS6KL1Q9Y6S9 549 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 CEP350Q5VT06 3117 aa16.13■□□□□ 0.17
ARHGEF40-203ENST00000554514 BTBD19C9JJ37 291 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms