RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CLLU1OSQ5K130 101 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 CBWD5Q5RIA9 395 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 TMEM240Q5SV17 173 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 LMBRD2Q68DH5 695 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-212ENST00000554486 JADE1Q6IE81 842 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 SARM1Q6SZW1 724 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 ZNF365Q70YC5 407 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 MIB1Q86YT6 1006 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 TMEM151BQ8IW70 566 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 HACE1Q8IYU2 909 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 NXPE1Q8N323 547 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 PPM1KQ8N3J5 372 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 RNF169Q8NCN4 708 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 OR5B17Q8NGF7 314 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 PHOSPHO1Q8TCT1 267 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 CCDC127Q96BQ5 260 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 GAD1Q99259 594 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 IRF2BPLQ9H1B7 796 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 VPS16Q9H269 839 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 ASB7Q9H672 318 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 ELAC1Q9H777 363 aaKnown RBP6.76□□□□□ -1.33
SCFD1-212ENST00000554486 PLEKHA5Q9HAU0 1116 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 GRPEL1Q9HAV7 217 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 MIOSQ9NXC5 875 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 IFNKQ9P0W0 207 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 B4GALT6Q9UBX8 382 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 WASF3Q9UPY6 502 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 GIT1Q9Y2X7 761 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 KCTD3Q9Y597 815 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.76□□□□□ -1.33
SCFD1-212ENST00000554486 COL4A6Q14031 1691 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 SMIM28A0A1B0GU29 152 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 ARL5CA6NH57 179 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 KRIT1O00522 736 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 PMM2O15305 246 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 DNAJC6O75061 913 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 BAIAP3O94812 1187 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 VNN1O95497 513 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 SERPINC1P01008 464 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 FGBP02675 491 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 AFPP02771 609 aaKnown RBP6.75□□□□□ -1.33
SCFD1-212ENST00000554486 C4BPAP04003 597 aaKnown RBP6.75□□□□□ -1.33
SCFD1-212ENST00000554486 ASGR2P07307 311 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 GTF2H1P32780 548 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 THBS2P35442 1172 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 MLH1P40692 756 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 GCLMP48507 274 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 FMO5P49326 533 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 GATMP50440 423 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 GUCY2FP51841 1108 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 CDR1P51861 262 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 UBASH3AP57075 661 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 WDR5P61964 334 aaKnown RBP6.75□□□□□ -1.33
SCFD1-212ENST00000554486 TFAMQ00059 246 aaKnown RBP6.75□□□□□ -1.33
SCFD1-212ENST00000554486 TMEM132DQ14C87 1099 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 SURF1Q15526 300 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 ZACNQ401N2 412 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 GLRA4Q5JXX5 417 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 TCERG1LQ5VWI1 586 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 C15orf39Q6ZRI6 1047 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 UBE2R2Q712K3 238 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-212ENST00000554486 OTOP2Q7RTS6 562 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 WDR49Q8IV35 697 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 CD302Q8IX05 232 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 AFAP1L2Q8N4X5 818 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 CHST14Q8NCH0 376 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 ANKRD20A12PQ8NF67 263 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 CXorf38Q8TB03 319 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 HERVK_113Q902F9 699 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 C18orf25Q96B23 403 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-212ENST00000554486 PGBD4Q96DM1 585 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 PPP1R10Q96QC0 940 aaKnown RBP6.75□□□□□ -1.33
SCFD1-212ENST00000554486 FNBP1Q96RU3 617 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 LBHD1Q9BQE6 289 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-212ENST00000554486 SYT3Q9BQG1 590 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 XPO4Q9C0E2 1151 aaKnown RBP6.75□□□□□ -1.33
SCFD1-212ENST00000554486 MTMR12Q9C0I1 747 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 TMEM117Q9H0C3 514 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 NDST4Q9H3R1 872 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 CAAP1Q9H8G2 361 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 MMRN2Q9H8L6 949 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 RSAD1Q9HA92 442 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 TMEM8AQ9HCN3 771 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 TMEM161AQ9NX61 479 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 SIX4Q9UIU6 781 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 DERAQ9Y315 318 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 PCDHB7Q9Y5E2 793 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 NR2E3Q9Y5X4 410 aa6.75□□□□□ -1.33
SCFD1-212ENST00000554486 GTPBP10A4D1E9 387 aaKnown RBP6.74□□□□□ -1.33
SCFD1-212ENST00000554486 ANKRD62A6NC57 917 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 STX10O60499 249 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 LRG1P02750 347 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 ACTN1P12814 892 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 ATF2P15336 505 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 TNNI1P19237 187 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 IGFBP6P24592 240 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-212ENST00000554486 FLT3P36888 993 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 PBX1P40424 430 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 MC3RP41968 323 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 MAGEA10P43363 369 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms