RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ESRRAP11474 423 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PECAM1P16284 738 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ACSL1P33121 698 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PPP1R2P41236 205 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CCR3P51677 355 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CSNK2BP67870 215 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ARHGAP8P85298 464 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 DR1Q01658 176 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 DLX2Q07687 328 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CUL4BQ13620 913 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 COL9A3Q14050 684 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 HABP2Q14520 560 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 STK38Q15208 465 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TMEM266Q2M3C6 531 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 USH1GQ495M9 461 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 Q4G0T1 1027 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF484Q5JVG2 852 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 THOC7Q6I9Y2 204 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 KIAA1841Q6NSI8 718 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PPP1R2P3Q6NXS1 205 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 DENND5BQ6ZUT9 1274 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CHST15Q7LFX5 561 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 THAP5Q7Z6K1 395 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CTAGE6Q86UF2 777 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 KRT73Q86Y46 540 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CTAGE4Q8IX94 777 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MB21D2Q8IYB1 491 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 FBXL16Q8N461 479 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF565Q8N9K5 539 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 COLGALT1Q8NBJ5 622 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 SIMC1Q8NDZ2 872 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 VN1R2Q8NFZ6 395 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 OR56B2PQ8NGI1 322 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 LILRB4Q8NHJ6 448 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ZSCAN18Q8TBC5 510 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 IGDCC4Q8TDY8 1250 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 SLC22A17Q8WUG5 538 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MRPS27Q92552 414 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 EZH1Q92800 747 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MIEF2Q96C03 454 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TMEM74Q96NL1 305 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CELF4Q9BZC1 486 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 GORASP2Q9H8Y8 452 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MLXIPQ9HAP2 919 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PDE11AQ9HCR9 933 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 NMRK1Q9NWW6 199 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TMEM161AQ9NX61 479 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CLDND1Q9NY35 253 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MUTYHQ9UIF7 546 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 RASAL2Q9UJF2 1139 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 WDR37Q9Y2I8 494 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CDY2AQ9Y6F7 541 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PRUNE2Q8WUY3 3088 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 EVPLQ92817 2033 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MIA3Q5JRA6 1907 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 BRWD1Q9NSI6 2320 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ESYT2A0FGR8 921 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 EME2A4GXA9 379 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PRR23AA6NEV1 266 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ZBTB42B2RXF5 422 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 GOLGA8MH3BSY2 632 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 AP3D1O14617 1153 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 NVLO15381 856 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 POLR2DO15514 142 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 SLC25A17O43808 307 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CDK4P11802 303 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MYCLP12524 364 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MYL4P12829 197 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PDGFRAP16234 1089 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PAMP19021 973 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MCM3P25205 808 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 NOS3P29474 1203 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PDIA3P30101 505 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PRKAR1BP31321 381 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MCM5P33992 734 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CLCN4P51793 760 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CRYBB1P53674 252 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 B2MP61769 119 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 USP46P62068 366 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CDC42EP1Q00587 391 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 LIPEQ05469 1076 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 GTF2H3Q13889 308 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 DHX34Q14147 1143 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 DOC2AQ14183 400 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 FRG1Q14331 258 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PLCL1Q15111 1095 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TSTQ16762 297 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 HADHQ16836 314 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ALG11Q2TAA5 492 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CCDC40Q4G0X9 1142 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 FSCBQ5H9T9 825 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 KLC3Q6P597 504 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PGM2L1Q6PCE3 622 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 SYCE2Q6PIF2 218 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MICALCLQ6ZW33 695 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CYB5R4Q7L1T6 521 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TMCO2Q7Z6W1 182 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ZDHHC17Q8IUH5 632 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CDH26Q8IXH8 852 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CTCFLQ8NI51 663 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms