RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 ZNF778Q96MU6 729 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 DHX33Q9H6R0 707 aaKnown RBP17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 PLAC1Q9HBJ0 212 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 PCDH18Q9HCL0 1135 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 DNAJC16Q9Y2G8 782 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 MFHAS1Q9Y4C4 1052 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 NFICP08651 508 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 CDH2P19022 906 aaPredicted RBP17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 FUT4P22083 530 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 OLIG2Q13516 323 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 LPIN1Q14693 890 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 OR6B2Q6IFH4 312 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 XYLT1Q86Y38 959 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 NDUFAF2Q8N183 169 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 PPP1R14CQ8TAE6 165 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 WRNIP1Q96S55 665 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 RAB26Q9ULW5 256 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 PSMD13Q9UNM6 376 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 CEPT1Q9Y6K0 416 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 AK5Q9Y6K8 562 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 ITM2AO43736 263 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 NAMPTP43490 491 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 ATXN3P54252 364 aaPredicted RBP17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 RPL10AP62906 217 aaKnown RBP17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 YWHAZP63104 245 aaKnown RBP17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 HADHQ16836 314 aaKnown RBP17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 DUOXA2Q1HG44 320 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 BRSK2Q8IWQ3 736 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 PIWIL2Q8TC59 973 aaKnown RBP17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 LPAR1Q92633 364 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 DDX56Q9NY93 547 aaKnown RBP17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 HCRTO43612 131 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 ZNF189O75820 626 aaPredicted RBP17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 C1QAP02745 245 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 ITGB3P05106 788 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 APOFQ13790 326 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 CASC4Q6P4E1 433 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 ATG14Q6ZNE5 492 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 ANKRD23Q86SG2 305 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 DDI1Q8WTU0 396 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 ADPGKQ9BRR6 497 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 B3GNT5Q9BYG0 378 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 XYLT2Q9H1B5 865 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 MINDY3Q9H8M7 445 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 GJA3Q9Y6H8 435 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 DKC1O60832 514 aaKnown RBP eCLIP17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 TRPA1O75762 1119 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 ARL2P36404 184 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 CD97P48960 835 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 NR1H2P55055 460 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 ACAP1Q15027 740 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 BORAQ6PGQ7 559 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 FRMD7Q6ZUT3 714 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 UBR7Q8N806 425 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 GFM2Q969S9 779 aaKnown RBP17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 HEXIM2Q96MH2 286 aaKnown RBP17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 LIN28AQ9H9Z2 209 aaKnown RBP17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 FAIMQ9NVQ4 179 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 C6orf203Q9P0P8 240 aaPredicted RBP17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 FAF1Q9UNN5 650 aaPredicted RBP17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 CNTN6Q9UQ52 1028 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 TTLL3Q9Y4R7 772 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 STYXL1Q9Y6J8 313 aa17.42■□□□□ 0.38
PPP4R3A-202ENST00000554390 MSCO60682 206 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 FAM58BPP0C7Q3 252 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 PDGFRAP16234 1089 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 CLCN3P51790 818 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 C6orf52Q5T4I8 152 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 SLFN12LQ6IEE8 588 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 AMIGO2Q86SJ2 522 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 RAB3IL1Q8TBN0 382 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 TFB1MQ8WVM0 346 aaKnown RBP17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 RXFP2Q8WXD0 754 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 ELOVL4Q9GZR5 314 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 CXCL16Q9H2A7 254 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 IFT122Q9HBG6 1241 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 FAM49BQ9NUQ9 324 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 TUBGCP4Q9UGJ1 667 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 TBC1D12O60347 775 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 HOXC6P09630 235 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 UBA1P22314 1058 aaKnown RBP17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 L1CAMP32004 1257 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 MSX2P35548 267 aaPredicted RBP17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 LGSNQ5TDP6 509 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 YIPF2Q9BWQ6 316 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 ZNF358Q9NW07 568 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 THEGQ9P2T0 379 aa17.41■□□□□ 0.38
PPP4R3A-202ENST00000554390 E9PBE3 544 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 FAM189A1O60320 539 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 SPAG6O75602 509 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 MICAL2O94851 1124 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 METTL18O95568 372 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 PRKCBP05771 671 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 KRT7P08729 469 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 EIF4BP23588 611 aaKnown RBP17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 MTTPP55157 894 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 AMHR2Q16671 573 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 Q3C1V9 767 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms