RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PARNO95453 639 aaKnown RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 FUCA1P04066 466 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 NR3C1P04150 777 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 MPOP05164 745 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 MMEP08473 750 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 MYL3P08590 195 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 IQCF3P0C7M6 154 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 GZMAP12544 262 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 ALAS1P13196 640 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 CYP11B2P19099 503 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 CCND1P24385 295 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 ARL4AP40617 200 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 SLC12A3P55017 1021 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 MAGOHP61326 146 aaKnown RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 PURAQ00577 322 aaKnown RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 POU5F1Q01860 360 aaKnown RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 NHLH1Q02575 133 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 ZNF543Q08ER8 600 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 IKQ13123 557 aaPredicted RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 CALCOCO2Q13137 446 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 ZNF268Q14587 947 aaPredicted RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 ZKSCAN8Q15776 578 aaPredicted RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 UAP1Q16222 522 aaPredicted RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 CYP1B1Q16678 543 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 CMPK2Q5EBM0 449 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 FAM209AQ5JX71 171 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 SEL1L2Q5TEA6 688 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 SLFN13Q68D06 897 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 DUPD1Q68J44 220 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 NSMFQ6X4W1 530 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 ZNF571Q7Z3V5 609 aaPredicted RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 LZTR1Q8N653 840 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 GPATCH11Q8N954 259 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 CCDC63Q8NA47 563 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 SLC30A5Q8TAD4 765 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 GRK7Q8WTQ7 553 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 GDPD5Q8WTR4 605 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 KCTD13Q8WZ19 329 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 DIO2Q92813 273 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 MAGOHBQ96A72 148 aaKnown RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 CEP95Q96GE4 821 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 TGS1Q96RS0 853 aaKnown RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 OSBPL2Q9H1P3 480 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 PSTPIP2Q9H939 334 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 TUFT1Q9NNX1 390 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 INTS9Q9NV88 658 aaKnown RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 HAUS2Q9NVX0 235 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 CYP39A1Q9NYL5 469 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 GCNT4Q9P109 453 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 FAM50BQ9Y247 325 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 FRMD4BQ9Y2L6 1034 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 FRMPD4Q14CM0 1322 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 CHD7Q9P2D1 2997 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 TRAV20A0A0B4J274 112 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 ZC3H12DA2A288 527 aaKnown RBP6.22□□□□□ -1.41
VPS33B-203ENST00000554264 ANKRD65E5RJM6 399 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 DAPK3O43293 454 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 DCXO43602 365 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 EFCAB14O75071 495 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 TDP2O95551 362 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 ATP6V1G2O95670 118 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 EYA4O95677 639 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 FGGP02679 453 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 C1QTNF9P0C862 333 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 KCNA5P22460 613 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 CIITAP33076 1130 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 ABCD1P33897 745 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 BCL6P41182 706 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 RASSF2P50749 326 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 CCNG1P51959 295 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 SEC24CP53992 1094 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 SLC18A1P54219 525 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 ERVK-21P61565 698 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 WDR5P61964 334 aaKnown RBP6.22□□□□□ -1.41
VPS33B-203ENST00000554264 IRX1P78414 480 aaPredicted RBP6.22□□□□□ -1.41
VPS33B-203ENST00000554264 SRSF3P84103 164 aaKnown RBP6.22□□□□□ -1.41
VPS33B-203ENST00000554264 SLC35G1Q2M3R5 365 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 TNFAIP8L3Q5GJ75 292 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 CNKSR3Q6P9H4 555 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 KCNT2Q6UVM3 1135 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 PPP1R21Q6ZMI0 780 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 ARHGEF18Q6ZSZ5 1173 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 TRPM8Q7Z2W7 1104 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 USP37Q86T82 979 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 CILP2Q8IUL8 1156 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 TEX9Q8N6V9 391 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 OR6J1Q8NGC5 347 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.22□□□□□ -1.41
VPS33B-203ENST00000554264 HAS1Q92839 578 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 KCNN1Q92952 543 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 SLC35C1Q96A29 364 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 EXOC2Q96KP1 924 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 ZNF317Q96PQ6 595 aaPredicted RBP6.22□□□□□ -1.41
VPS33B-203ENST00000554264 IWS1Q96ST2 819 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 MPHOSPH6Q99547 160 aaKnown RBP6.22□□□□□ -1.41
VPS33B-203ENST00000554264 RAD9AQ99638 391 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 CCDC77Q9BR77 488 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 TIPINQ9BVW5 301 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 WDR11Q9BZH6 1224 aa6.22□□□□□ -1.41
VPS33B-203ENST00000554264 DDX47Q9H0S4 455 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms