RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 ATP2C1P98194 919 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-224ENST00000554040 SRSF1Q07955 248 aaKnown RBP eCLIP7.33□□□□□ -1.24
ATXN3-224ENST00000554040 STRN3Q13033 797 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 RESTQ13127 1097 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 SAFBQ15424 915 aaKnown RBP eCLIP7.33□□□□□ -1.24
ATXN3-224ENST00000554040 NFE2Q16621 373 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-224ENST00000554040 HLA-BQ31612 363 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 ZC3H12AQ5D1E8 599 aaKnown RBP7.33□□□□□ -1.24
ATXN3-224ENST00000554040 WSCD1Q658N2 575 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 RUFY3Q7L099 469 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 FILIP1Q7Z7B0 1213 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 ZNF513Q8N8E2 541 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-224ENST00000554040 WBP1Q96G27 269 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 DRC1Q96MC2 740 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 PYM1Q9BRP8 204 aaKnown RBP7.33□□□□□ -1.24
ATXN3-224ENST00000554040 RPF1Q9H9Y2 349 aaKnown RBP7.33□□□□□ -1.24
ATXN3-224ENST00000554040 CD248Q9HCU0 757 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 BRMS1Q9HCU9 246 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 KCNG1Q9UIX4 513 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 NFE2L3Q9Y4A8 694 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-224ENST00000554040 TNRC6BQ9UPQ9 1833 aaKnown RBP7.32□□□□□ -1.24
ATXN3-224ENST00000554040 BTBD18B2RXH4 712 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 B8ZZF3 427 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 CD8BP10966 210 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 HOXB2P14652 356 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 NTSR1P30989 418 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 CD96P40200 585 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 MATKP42679 507 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 MATR3P43243 847 aaKnown RBP eCLIP7.32□□□□□ -1.24
ATXN3-224ENST00000554040 TAF6P49848 677 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 TSPY1Q01534 308 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 BNC1Q01954 994 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 PLCL1Q15111 1095 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 ENOX2Q16206 610 aaKnown RBP7.32□□□□□ -1.24
ATXN3-224ENST00000554040 PREPLQ4J6C6 727 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-224ENST00000554040 TAF1BQ53T94 588 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-224ENST00000554040 BMP2KLQ5H9B9 411 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 HAUS3Q68CZ6 603 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 JADE1Q6IE81 842 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 DHRS13Q6UX07 377 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 C1orf186Q6ZWK4 172 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 SULF2Q8IWU5 870 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 CD302Q8IX05 232 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 TMEM161BQ8NDZ6 487 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 IPO4Q8TEX9 1081 aaKnown RBP7.32□□□□□ -1.24
ATXN3-224ENST00000554040 LEO1Q8WVC0 666 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-224ENST00000554040 ISL2Q96A47 359 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 NXPE2Q96DL1 559 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 MISP3Q96FF7 219 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 DUSP23Q9BVJ7 150 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 CCSER1Q9C0I3 900 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 GPN3Q9UHW5 284 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-224ENST00000554040 ADAMTS6Q9UKP5 1117 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.32□□□□□ -1.24
ATXN3-224ENST00000554040 BTBD3Q9Y2F9 522 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 CITO14578 2027 aa7.32□□□□□ -1.24
ATXN3-224ENST00000554040 ZNF638Q14966 1978 aaKnown RBP7.31□□□□□ -1.24
ATXN3-224ENST00000554040 PYCARD-AS1I3L0S3 204 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 BCAT2O15382 392 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-224ENST00000554040 FAM189A1O60320 539 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 DTNBO60941 627 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 JUPP14923 745 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 FUT4P22083 530 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 CD6P30203 668 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 MCM7P33993 719 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 CCT6AP40227 531 aaKnown RBP7.31□□□□□ -1.24
ATXN3-224ENST00000554040 WASP42768 502 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 OXCT1P55809 520 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 SLC7A9P82251 487 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 SEMG2Q02383 582 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 GAD2Q05329 585 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 KDSRQ06136 332 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 MYO1EQ12965 1108 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 MAPK7Q13164 816 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 PDIA5Q14554 519 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 CCDC157Q569K6 752 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 SDE2Q6IQ49 451 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 RINT1Q6NUQ1 792 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 FAM214BQ7L5A3 538 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 MIB1Q86YT6 1006 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 ZCCHC9Q8N567 271 aaKnown RBP7.31□□□□□ -1.24
ATXN3-224ENST00000554040 CADM4Q8NFZ8 388 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 WASF1Q92558 559 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 ACBD6Q9BR61 282 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 RNF38Q9H0F5 515 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 MIR1-1HGQ9H1L0 117 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 CD93Q9NPY3 652 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 DDX19AQ9NUU7 478 aaKnown RBP7.31□□□□□ -1.24
ATXN3-224ENST00000554040 ORC3Q9UBD5 711 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-224ENST00000554040 DNM3Q9UQ16 869 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 DERAQ9Y315 318 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 CPQQ9Y646 472 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 AK5Q9Y6K8 562 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 BSNQ9UPA5 3926 aa7.31□□□□□ -1.24
ATXN3-224ENST00000554040 MYO16Q9Y6X6 1858 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 ZNF840PA6NDX5 716 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 MEI4A8MW99 385 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 KPNA7A9QM74 516 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 OGTO15294 1046 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms