RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 KCNK16Q96T55 309 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 EDEM2Q9BV94 578 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 GOLPH3Q9H4A6 298 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 COMMD8Q9NX08 183 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 HSFX1Q9UBD0 423 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 AFF4Q9UHB7 1163 aaKnown RBP15.07■□□□□ 0
SHMT2-208ENST00000553868 TMEM59LQ9UK28 342 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 KLK13Q9UKR3 277 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 MRFAP1Q9Y605 127 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 PIAS3Q9Y6X2 628 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 C2CD4BA6NLJ0 364 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 HHLA1C9JL84 531 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 KCNK3O14649 394 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 ADAM12O43184 909 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 PSTPIP1O43586 416 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 GABBR2O75899 941 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 GJB6O95452 261 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 C1RP00736 705 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 HNRNPA1P09651 372 aaKnown RBP eCLIP15.06■□□□□ 0
SHMT2-208ENST00000553868 PDGFRAP16234 1089 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 FCARP24071 287 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 CTNNA1P35221 906 aaKnown RBP15.06■□□□□ 0
SHMT2-208ENST00000553868 MPLP40238 635 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 PAFAH1B1P43034 410 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 SSR1P43307 286 aaKnown RBP15.06■□□□□ 0
SHMT2-208ENST00000553868 TUFMP49411 452 aaKnown RBP15.06■□□□□ 0
SHMT2-208ENST00000553868 CACNA2D1P54289 1103 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 RNASE9P60153 205 aaKnown RBP15.06■□□□□ 0
SHMT2-208ENST00000553868 YWHAZP63104 245 aaKnown RBP15.06■□□□□ 0
SHMT2-208ENST00000553868 ROR1Q01973 937 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 HADHQ16836 314 aaKnown RBP15.06■□□□□ 0
SHMT2-208ENST00000553868 MGAT5BQ3V5L5 792 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 CCDC181Q5TID7 509 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 LRRC38Q5VT99 294 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 RHOT1Q8IXI2 618 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 CEP112Q8N8E3 955 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 MNS1Q8NEH6 495 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 SLC7A14Q8TBB6 771 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 ADAM32Q8TC27 787 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 RXFP2Q8WXD0 754 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 FAM149B1Q96BN6 582 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 PGLYRP2Q96PD5 576 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 ULBP1Q9BZM6 244 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 TRIM7Q9C029 511 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 CARD9Q9H257 536 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 FBXO44Q9H4M3 255 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 RRN3Q9NYV6 651 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.06■□□□□ 0
SHMT2-208ENST00000553868 EHD2Q9NZN4 543 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 MRPS23Q9Y3D9 190 aaKnown RBP15.06■□□□□ 0
SHMT2-208ENST00000553868 PCDHA3Q9Y5H8 950 aa15.06■□□□□ 0
SHMT2-208ENST00000553868 DAB1O75553 588 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 RTN3O95197 1032 aaPredicted RBP15.05■□□□□ -0
SHMT2-208ENST00000553868 HAPLN1P10915 354 aaPredicted RBP15.05■□□□□ -0
SHMT2-208ENST00000553868 CEBPBP17676 345 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 CETN2P41208 172 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 PTPN9P43378 593 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 DNA2P51530 1060 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 RWDD2BP57060 319 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 DAOAP59103 153 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 RAB33AQ14088 237 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 PM20D1Q6GTS8 502 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 CC2D1AQ6P1N0 951 aaPredicted RBP15.05■□□□□ -0
SHMT2-208ENST00000553868 RNF19BQ6ZMZ0 732 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 WDR5BQ86VZ2 330 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 NUP93Q8N1F7 819 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 ARHGAP18Q8N392 663 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 EMC1Q8N766 993 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 ATAD1Q8NBU5 361 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 ZNF461Q8TAF7 563 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 CD101Q93033 1021 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 ELSPBP1Q96BH3 223 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 LOXL4Q96JB6 756 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 SPATA17Q96L03 361 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 SEPT5Q99719 369 aaPredicted RBP15.05■□□□□ -0
SHMT2-208ENST00000553868 CLSTN3Q9BQT9 956 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 POPDC2Q9HBU9 364 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 ZNF334Q9HCZ1 680 aaPredicted RBP15.05■□□□□ -0
SHMT2-208ENST00000553868 TMEM51Q9NW97 253 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 STAP1Q9ULZ2 295 aa15.05■□□□□ -0
SHMT2-208ENST00000553868 PACSIN2Q9UNF0 486 aaPredicted RBP15.05■□□□□ -0
SHMT2-208ENST00000553868 VWA8A3KMH1 1905 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 WDR27A2RRH5 827 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 CAPN9O14815 690 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 DDX3YO15523 660 aaKnown RBP15.04■□□□□ -0
SHMT2-208ENST00000553868 XYLBO75191 536 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 PAPSS2O95340 614 aaPredicted RBP15.04■□□□□ -0
SHMT2-208ENST00000553868 KRT7P08729 469 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 GDI1P31150 447 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 ELF1P32519 619 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 NOS2P35228 1153 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 PCK1P35558 622 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 MATKP42679 507 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 SLC5A3P53794 718 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 OGDHQ02218 1023 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 ODF2Q5BJF6 829 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 BEND5Q7L4P6 421 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 PSMB7Q99436 277 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 NAP1L3Q99457 506 aaPredicted RBP15.04■□□□□ -0
SHMT2-208ENST00000553868 TMEM30AQ9NV96 361 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms