RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 NCAPGQ9BPX3 1015 aa14.59□□□□□ -0.07
ABCD4-219ENST00000553745 SNRNP25Q9BV90 132 aaKnown RBP14.59□□□□□ -0.07
ABCD4-219ENST00000553745 SMOC2Q9H3U7 446 aa14.59□□□□□ -0.07
ABCD4-219ENST00000553745 TLR8Q9NR97 1041 aaKnown RBP14.59□□□□□ -0.07
ABCD4-219ENST00000553745 GPATCH2LQ9NWQ4 482 aa14.59□□□□□ -0.07
ABCD4-219ENST00000553745 DDIT4Q9NX09 232 aa14.59□□□□□ -0.07
ABCD4-219ENST00000553745 DDX56Q9NY93 547 aaKnown RBP14.59□□□□□ -0.07
ABCD4-219ENST00000553745 RRN3Q9NYV6 651 aa14.59□□□□□ -0.07
ABCD4-219ENST00000553745 PDE4DIPQ5VU43 2346 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 LRRD1A4D1F6 860 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 GAS8O95995 478 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 IGLV3-25P01717 112 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 ZDHHC11BP0C7U3 371 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 CCT5P48643 541 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 COPS2P61201 443 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 CAV1Q03135 178 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 DRICH1Q6PGQ1 229 aaPredicted RBP14.58□□□□□ -0.08
ABCD4-219ENST00000553745 MFSD7Q6UXD7 560 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 ADGRD2Q7Z7M1 963 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 CROCCP2Q86T23 111 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 CASP10Q92851 521 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 PGAP3Q96FM1 320 aaPredicted RBP14.58□□□□□ -0.08
ABCD4-219ENST00000553745 SLC28A3Q9HAS3 691 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 WDR6Q9NNW5 1121 aaKnown RBP14.58□□□□□ -0.08
ABCD4-219ENST00000553745 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.58□□□□□ -0.08
ABCD4-219ENST00000553745 ASIC3Q9UHC3 531 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 SFMBT1Q9UHJ3 866 aa14.58□□□□□ -0.08
ABCD4-219ENST00000553745 RRP15Q9Y3B9 282 aaKnown RBP14.58□□□□□ -0.08
ABCD4-219ENST00000553745 IRAK2O43187 625 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 MSI1O43347 362 aaKnown RBP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 CD48P09326 243 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 CHKAP35790 457 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 CETN2P41208 172 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 ITGA8P53708 1063 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 EPHB3P54753 998 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 TAF12Q16514 161 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 CA9Q16790 459 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 ZC3H12AQ5D1E8 599 aaKnown RBP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 C6orf118Q5T5N4 469 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 MSANTD2Q6P1R3 559 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 CHRDL2Q6WN34 429 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 SPOCD1Q6ZMY3 1216 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 CCDC149Q6ZUS6 474 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 RNF139Q8WU17 664 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 PSMG2Q969U7 264 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 TRMT2BQ96GJ1 504 aaKnown RBP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 MYRFLQ96LU7 910 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 RABEP2Q9H5N1 569 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 ZNF334Q9HCZ1 680 aaPredicted RBP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 TMPRSS4Q9NRS4 437 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 CLIC5Q9NZA1 410 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 REV3LO60673 3130 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 DOCK6Q96HP0 2047 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 C3orf70A6NLC5 250 aaPredicted RBP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 MDM4O15151 490 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 CLASP2O75122 1294 aaKnown RBP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 LRG1P02750 347 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 EPCAMP16422 314 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 PSEN1P49768 467 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 ODF2Q5BJF6 829 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 PDE12Q6L8Q7 609 aaKnown RBP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 DNAJB7Q7Z6W7 309 aaPredicted RBP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 PDZD8Q8NEN9 1154 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 CMASQ8NFW8 434 aaPredicted RBP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 TEKT4Q8WW24 435 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 ROPN1BQ9BZX4 212 aaPredicted RBP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 TSPYL1Q9H0U9 437 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 CDC42EP4Q9H3Q1 356 aaKnown RBP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 CCSER2Q9H7U1 834 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 ROPN1Q9HAT0 212 aaPredicted RBP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 MAN1C1Q9NR34 630 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.57□□□□□ -0.08
ABCD4-219ENST00000553745 AP4E1Q9UPM8 1137 aa14.57□□□□□ -0.08
ABCD4-219ENST00000553745 PER2O15055 1255 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 LIASO43766 372 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 KRT10P13645 584 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 KDELR1P24390 212 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 CDKN2BP42772 138 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 ARSEP51690 589 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 CDH6P55285 790 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 EIF4EBP2Q13542 120 aaPredicted RBP14.56□□□□□ -0.08
ABCD4-219ENST00000553745 TRIP13Q15645 432 aaPredicted RBP14.56□□□□□ -0.08
ABCD4-219ENST00000553745 BOLA3Q53S33 107 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 ERMARDQ5T6L9 678 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 NLRP14Q86W24 1093 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 SLC22A17Q8WUG5 538 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 OVCA2Q8WZ82 227 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 ZNF512Q96ME7 567 aaPredicted RBP14.56□□□□□ -0.08
ABCD4-219ENST00000553745 FAM118BQ9BPY3 351 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 MAGEB5Q9BZ81 275 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 PRO3102Q9H379 93 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 CNOT10Q9H9A5 744 aaKnown RBP14.56□□□□□ -0.08
ABCD4-219ENST00000553745 ANLNQ9NQW6 1124 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 ANAPC5Q9UJX4 755 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 FZD10Q9ULW2 581 aa14.56□□□□□ -0.08
ABCD4-219ENST00000553745 DRG1Q9Y295 367 aaKnown RBP14.56□□□□□ -0.08
ABCD4-219ENST00000553745 hCG_1818297A0A087WSY0 165 aa14.55□□□□□ -0.08
ABCD4-219ENST00000553745 I6L893 689 aaPredicted RBP14.55□□□□□ -0.08
ABCD4-219ENST00000553745 EBAG9O00559 213 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms