RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 NT5C3BQ969T7 300 aa23.66■■□□□ 1.38
TDP1-206ENST00000553569 PRICKLE1Q96MT3 831 aaPredicted RBP23.66■■□□□ 1.38
TDP1-206ENST00000553569 C2orf42Q9NWW7 574 aa23.66■■□□□ 1.38
TDP1-206ENST00000553569 CLEC4EQ9ULY5 219 aa23.66■■□□□ 1.38
TDP1-206ENST00000553569 KCNU1A8MYU2 1149 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 TBL1XO60907 577 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 PDGFRAP16234 1089 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 TACR2P21452 398 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 CCR3P51677 355 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 CSTF1Q05048 431 aaKnown RBP23.65■■□□□ 1.38
TDP1-206ENST00000553569 PPP2R5DQ14738 602 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 CDO1Q16878 200 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 C2orf27AQ580R0 203 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 TSSK4Q6SA08 328 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 ARCQ7LC44 396 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 VPS36Q86VN1 386 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 MAML2Q8IZL2 1156 aaPredicted RBP23.65■■□□□ 1.38
TDP1-206ENST00000553569 LGI2Q8N0V4 545 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 HJURPQ8NCD3 748 aaPredicted RBP23.65■■□□□ 1.38
TDP1-206ENST00000553569 MYEOVQ96EZ4 313 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 PRMT8Q9NR22 394 aaPredicted RBP23.65■■□□□ 1.38
TDP1-206ENST00000553569 STIM2Q9P246 746 aa23.65■■□□□ 1.38
TDP1-206ENST00000553569 TYW5A2RUC4 315 aaKnown RBP23.64■■□□□ 1.37
TDP1-206ENST00000553569 C2CD4BA6NLJ0 364 aa23.64■■□□□ 1.37
TDP1-206ENST00000553569 FTLP02792 175 aaPredicted RBP23.64■■□□□ 1.37
TDP1-206ENST00000553569 CISD3P0C7P0 127 aa23.64■■□□□ 1.37
TDP1-206ENST00000553569 SDC4P31431 198 aa23.64■■□□□ 1.37
TDP1-206ENST00000553569 RDXP35241 583 aaKnown RBP23.64■■□□□ 1.37
TDP1-206ENST00000553569 TIE1P35590 1138 aa23.64■■□□□ 1.37
TDP1-206ENST00000553569 C15orf59Q2T9L4 293 aaPredicted RBP23.64■■□□□ 1.37
TDP1-206ENST00000553569 MS4A13Q5J8X5 152 aa23.64■■□□□ 1.37
TDP1-206ENST00000553569 NUDT18Q6ZVK8 323 aa23.64■■□□□ 1.37
TDP1-206ENST00000553569 USP33Q8TEY7 942 aa23.64■■□□□ 1.37
TDP1-206ENST00000553569 PGAP3Q96FM1 320 aaPredicted RBP23.64■■□□□ 1.37
TDP1-206ENST00000553569 MCEEQ96PE7 176 aa23.64■■□□□ 1.37
TDP1-206ENST00000553569 ZDHHC4Q9NPG8 344 aa23.64■■□□□ 1.37
TDP1-206ENST00000553569 POLR3BQ9NW08 1133 aaPredicted RBP23.64■■□□□ 1.37
TDP1-206ENST00000553569 ADAMTS1Q9UHI8 967 aa23.64■■□□□ 1.37
TDP1-206ENST00000553569 MUC6Q6W4X9 2439 aa23.64■■□□□ 1.37
TDP1-206ENST00000553569 TCRBV5S1A1TA0A578 114 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 SIGLEC16A6NMB1 481 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 F5H5T6 163 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 MFAP3LO75121 409 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 ATG13O75143 517 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 RTN2O75298 545 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 ADCY5O95622 1261 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 F9P00740 461 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 GZMAP12544 262 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 GPD1P21695 349 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 RFC1P35251 1148 aaPredicted RBP23.63■■□□□ 1.37
TDP1-206ENST00000553569 GGCXP38435 758 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 TNFRSF4P43489 277 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 CXCL12P48061 93 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 CXCR3P49682 368 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 RPS24P62847 133 aaKnown RBP23.63■■□□□ 1.37
TDP1-206ENST00000553569 CCDC14Q49A88 953 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 BRMS1LQ5PSV4 323 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 EMC10Q5UCC4 262 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 CFAP52Q8N1V2 620 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 OR8K1Q8NGG5 319 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 CCDC26Q8TAB7 109 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 ZNF653Q96CK0 615 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 TKTL2Q9H0I9 626 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 WDCPQ9H6R7 721 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 FAM86C1Q9NVL1 165 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 ARHGAP20Q9P2F6 1191 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 FBXO10Q9UK96 956 aa23.63■■□□□ 1.37
TDP1-206ENST00000553569 A0A0A0MRY4 1105 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 ANKRD62A6NC57 917 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 PAGE1O75459 146 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 SP9P0CG40 484 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 ADKP55263 362 aaKnown RBP23.62■■□□□ 1.37
TDP1-206ENST00000553569 RAB6CQ53S08 254 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 DCUN1D2Q6PH85 259 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 WDR59Q6PJI9 974 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 FAM131BQ86XD5 332 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 CCDC33Q8N5R6 958 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 ATOH1Q92858 354 aaPredicted RBP23.62■■□□□ 1.37
TDP1-206ENST00000553569 ACDQ96AP0 544 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 VCPIP1Q96JH7 1222 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 DNAJC7Q99615 494 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 RAB6CQ9H0N0 254 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 ANLNQ9NQW6 1124 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 ABHD10Q9NUJ1 306 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 ARHGEF38Q9NXL2 777 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 FBXO4Q9UKT5 387 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 PAXBP1Q9Y5B6 917 aa23.62■■□□□ 1.37
TDP1-206ENST00000553569 CHURC1-FNTBB4DL54 471 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 PRRT4C9JH25 899 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 KLF8O95600 359 aaPredicted RBP23.61■■□□□ 1.37
TDP1-206ENST00000553569 HNRNPH3P31942 346 aaKnown RBP23.61■■□□□ 1.37
TDP1-206ENST00000553569 PTPN9P43378 593 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 ZNF75DP51815 510 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 RPL7AP62424 266 aaKnown RBP23.61■■□□□ 1.37
TDP1-206ENST00000553569 MRPS21P82921 87 aaKnown RBP23.61■■□□□ 1.37
TDP1-206ENST00000553569 GEN1Q17RS7 908 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 TSR1Q2NL82 804 aaKnown RBP23.61■■□□□ 1.37
TDP1-206ENST00000553569 SH3PXD2AQ5TCZ1 1133 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 BNIPLQ7Z465 357 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 ANKS1BQ7Z6G8 1248 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms