RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PTPRNQ16849 979 aa18.94■□□□□ 0.62
SHMT2-206ENST00000553529 KLHDC7AQ5VTJ3 777 aa18.94■□□□□ 0.62
SHMT2-206ENST00000553529 RAP1GAP2Q684P5 730 aa18.94■□□□□ 0.62
SHMT2-206ENST00000553529 RBM43Q6ZSC3 357 aaKnown RBP18.94■□□□□ 0.62
SHMT2-206ENST00000553529 ENOSF1Q7L5Y1 443 aa18.94■□□□□ 0.62
SHMT2-206ENST00000553529 SLC41A1Q8IVJ1 513 aa18.94■□□□□ 0.62
SHMT2-206ENST00000553529 DEFB106AQ8N104 65 aa18.94■□□□□ 0.62
SHMT2-206ENST00000553529 C12orf50Q8NA57 414 aaPredicted RBP18.94■□□□□ 0.62
SHMT2-206ENST00000553529 ELOVL2Q9NXB9 296 aa18.94■□□□□ 0.62
SHMT2-206ENST00000553529 LNP1A1A4G5 178 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 PRR5-ARHGAP8B1AHC4 643 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 SLC30A4O14863 429 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 IRAK2O43187 625 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 MAP3K13O43283 966 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 MED7O43513 233 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 COPAP53621 1224 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 IRX4P78413 519 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 ARHGAP8P85298 464 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 KRT31Q15323 416 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 CYP2U1Q7Z449 544 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 TRMT11Q7Z4G4 463 aaKnown RBP18.93■□□□□ 0.62
SHMT2-206ENST00000553529 NOP9Q86U38 636 aaKnown RBP18.93■□□□□ 0.62
SHMT2-206ENST00000553529 FAM71AQ8IYT1 594 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 OR2I1PQ8NGU4 316 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 NETO1Q8TDF5 533 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 KCNV2Q8TDN2 545 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 SLC20A1Q8WUM9 679 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 PPP1R13BQ96KQ4 1090 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 LMLNQ96KR4 655 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 NAA15Q9BXJ9 866 aaKnown RBP18.93■□□□□ 0.62
SHMT2-206ENST00000553529 ANLNQ9NQW6 1124 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 TMPRSS4Q9NRS4 437 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 FANCLQ9NW38 375 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 GGA2Q9UJY4 613 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 INTS6Q9UL03 887 aaKnown RBP18.93■□□□□ 0.62
SHMT2-206ENST00000553529 SNX10Q9Y5X0 201 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 LAMA1P25391 3075 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 CKAP5Q14008 2032 aa18.93■□□□□ 0.62
SHMT2-206ENST00000553529 TRUB2O95900 331 aaKnown RBP18.92■□□□□ 0.62
SHMT2-206ENST00000553529 IGLV3-25P01717 112 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 MAOBP27338 520 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 CTSOP43234 321 aaPredicted RBP18.92■□□□□ 0.62
SHMT2-206ENST00000553529 RPL6Q02878 288 aaKnown RBP18.92■□□□□ 0.62
SHMT2-206ENST00000553529 LMAN2Q12907 356 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 ENPP2Q13822 863 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 PREPLQ4J6C6 727 aaPredicted RBP18.92■□□□□ 0.62
SHMT2-206ENST00000553529 DCAF6Q58WW2 860 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 STPG1Q5TH74 334 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 CDKAL1Q5VV42 579 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 OR6B2Q6IFH4 312 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 OLFML1Q6UWY5 402 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 ERMP1Q7Z2K6 904 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 CARNMT1Q8N4J0 409 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 STK32AQ8WU08 396 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 GOLGA1Q92805 767 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 EDEM2Q9BV94 578 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 GANQ9H2C0 597 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 VPS45Q9NRW7 570 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 PCDHGC3Q9UN70 934 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 TLR6Q9Y2C9 796 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 PCDHGA5Q9Y5G8 931 aa18.92■□□□□ 0.62
SHMT2-206ENST00000553529 I6L893 689 aaPredicted RBP18.91■□□□□ 0.62
SHMT2-206ENST00000553529 CAPN9O14815 690 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 EPHX1P07099 455 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 PABPC1P11940 636 aaKnown RBP18.91■□□□□ 0.62
SHMT2-206ENST00000553529 ACADSBP45954 432 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 YWHAZP63104 245 aaKnown RBP18.91■□□□□ 0.62
SHMT2-206ENST00000553529 CENPCQ03188 943 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 EIF4EBP2Q13542 120 aaPredicted RBP18.91■□□□□ 0.62
SHMT2-206ENST00000553529 RAB6CQ53S08 254 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 MS4A13Q5J8X5 152 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 MBLAC2Q68D91 279 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 RNF43Q68DV7 783 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 SDE2Q6IQ49 451 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 TRNP1Q6NT89 227 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 NUDT18Q6ZVK8 323 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 LPCAT2Q7L5N7 544 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 PHLDB2Q86SQ0 1253 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 FAM114A1Q8IWE2 563 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 LGI2Q8N0V4 545 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 DDX1Q92499 740 aaKnown RBP18.91■□□□□ 0.62
SHMT2-206ENST00000553529 SPACA7Q96KW9 195 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 SERPINB11Q96P15 392 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 SLC2A13Q96QE2 648 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 RAB6CQ9H0N0 254 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 HSD3B7Q9H2F3 369 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 POPDC2Q9HBU9 364 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 SLCO1B1Q9Y6L6 691 aa18.91■□□□□ 0.62
SHMT2-206ENST00000553529 C4orf47A7E2U8 309 aa18.9■□□□□ 0.62
SHMT2-206ENST00000553529 MMEP08473 750 aa18.9■□□□□ 0.62
SHMT2-206ENST00000553529 UCHL3P15374 230 aa18.9■□□□□ 0.62
SHMT2-206ENST00000553529 CYP11B1P15538 503 aa18.9■□□□□ 0.62
SHMT2-206ENST00000553529 SLC11A2P49281 568 aa18.9■□□□□ 0.62
SHMT2-206ENST00000553529 PTK2Q05397 1052 aa18.9■□□□□ 0.62
SHMT2-206ENST00000553529 RING1Q06587 406 aa18.9■□□□□ 0.62
SHMT2-206ENST00000553529 PPM1JQ5JR12 505 aa18.9■□□□□ 0.62
SHMT2-206ENST00000553529 NUGGCQ68CJ6 796 aa18.9■□□□□ 0.62
SHMT2-206ENST00000553529 SERPINA13PQ6UXR4 307 aa18.9■□□□□ 0.62
SHMT2-206ENST00000553529 KIAA0907Q7Z7F0 614 aaPredicted RBP18.9■□□□□ 0.62
SHMT2-206ENST00000553529 FAM124AQ86V42 546 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms