RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 GOLGA8FQ08AF8 430 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 SLC10A2Q12908 348 aaPredicted RBP4.33□□□□□ -1.72
PCNX4-206ENST00000553513 GRM4Q14833 912 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 GPR68Q15743 365 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 ST3GAL2Q16842 350 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 TBRG1Q3YBR2 411 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 MAP3K21Q5TCX8 1036 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 CCDC30Q5VVM6 783 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 ATG16L1Q676U5 607 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 ITPRIPL1Q6GPH6 555 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 TRABD2AQ86V40 505 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 HERC6Q8IVU3 1022 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 LRRC71Q8N4P6 559 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 TSPYL6Q8N831 410 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 C11orf44Q8N8P7 122 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 FSIP1Q8NA03 581 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 USP38Q8NB14 1042 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 RP9Q8TA86 221 aaKnown RBP4.33□□□□□ -1.72
PCNX4-206ENST00000553513 HERVK_113Q902F9 699 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 GLG1Q92896 1179 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 C17orf80Q9BSJ5 609 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 VN1R3Q9BXE9 311 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 VPS16Q9H269 839 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 KRT84Q9NSB2 600 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 DLL3Q9NYJ7 618 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 PI4KBQ9UBF8 816 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 DAPP1Q9UN19 280 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 CNTN6Q9UQ52 1028 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 TNFRSF18Q9Y5U5 241 aa4.33□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D3DA0A087WVF3 549 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D3IA0A087WXS9 549 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D3EA0A087X179 549 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D3KA0A087X1G2 549 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 ANKRD18BA2A2Z9 1011 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D3BA6NDS4 549 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D3FA6NER0 549 aaPredicted RBP4.32□□□□□ -1.72
PCNX4-206ENST00000553513 WIPF3A6NGB9 483 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 KIF28PB7ZC32 967 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D3LB9A6J9 549 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 FIBPO43427 364 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 ZBED4O75132 1171 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TAF5LO75529 589 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 RPP40O75818 363 aaKnown RBP4.32□□□□□ -1.72
PCNX4-206ENST00000553513 CER1O95813 267 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TBX18O95935 607 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 HNRNPA1P09651 372 aaKnown RBP eCLIP4.32□□□□□ -1.72
PCNX4-206ENST00000553513 NPSP0C0P6 89 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D3HP0C7X1 549 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 ATP1A3P13637 1013 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 LMO1P25800 156 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 PAFAH1B1P43034 410 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 PCP4P48539 62 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TPTEP56180 551 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 EIF4A1P60842 406 aaKnown RBP4.32□□□□□ -1.72
PCNX4-206ENST00000553513 SUMO2P61956 95 aaKnown RBP4.32□□□□□ -1.72
PCNX4-206ENST00000553513 SP2Q02086 613 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 PDCLQ13371 301 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 KCTD2Q14681 263 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 CLCA4Q14CN2 919 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TTC22Q5TAA0 569 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 ANKRD40Q6AI12 368 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D3GQ6DHY5 549 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 DGAT2L7PQ6IED9 249 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D3CQ6IPX1 549 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 C1orf122Q6ZSJ8 110 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 PARS2Q7L3T8 475 aaKnown RBP4.32□□□□□ -1.72
PCNX4-206ENST00000553513 CPOQ8IVL8 374 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 IZUMO1Q8IYV9 350 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D3Q8IZP1 549 aaPredicted RBP4.32□□□□□ -1.72
PCNX4-206ENST00000553513 ABRAQ8N0Z2 381 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 SEMA6DQ8NFY4 1073 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 OR1N1Q8NGS0 311 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 DPF1Q92782 380 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 R3HDM4Q96D70 268 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 RRP36Q96EU6 259 aaKnown RBP4.32□□□□□ -1.72
PCNX4-206ENST00000553513 FAR2Q96K12 515 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 G6PC2Q9NQR9 355 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 DUSP22Q9NRW4 184 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 SH3BP4Q9P0V3 963 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 AASSQ9UDR5 926 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 SERGEFQ9UGK8 458 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 SLC27A6Q9Y2P4 619 aa4.32□□□□□ -1.72
PCNX4-206ENST00000553513 SAC3D1A6NKF1 404 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 B4E171 279 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 EXOC5O00471 708 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 TIMM44O43615 452 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 GUCY1B2O75343 617 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 RTN3O95197 1032 aaPredicted RBP4.31□□□□□ -1.72
PCNX4-206ENST00000553513 CSF1RP07333 972 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 DLDP09622 509 aaKnown RBP4.31□□□□□ -1.72
PCNX4-206ENST00000553513 TNNT1P13805 278 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 ENGP17813 658 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 MMP8P22894 467 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 TSPAN7P41732 249 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 RXRGP48443 463 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 PNLIPRP1P54315 467 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.31□□□□□ -1.72
PCNX4-206ENST00000553513 SEMA3BQ13214 749 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 PRKG2Q13237 762 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D25Q3MII6 688 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms