RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 TTLL2Q9BWV7 592 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 PCGF6Q9BYE7 350 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 FOXP1Q9H334 677 aaPredicted RBP7.49□□□□□ -1.21
PCNX1-205ENST00000553508 HEY2Q9UBP5 337 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 B3GNT3Q9Y2A9 372 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 ZMYM2Q9UBW7 1377 aa7.48□□□□□ -1.21
PCNX1-205ENST00000553508 SERPINB3P29508 390 aa7.48□□□□□ -1.21
PCNX1-205ENST00000553508 RHPN2Q8IUC4 686 aa7.48□□□□□ -1.21
PCNX1-205ENST00000553508 ASB12Q8WXK4 309 aa7.48□□□□□ -1.21
PCNX1-205ENST00000553508 GATA5Q9BWX5 397 aaPredicted RBP7.48□□□□□ -1.21
PCNX1-205ENST00000553508 PRDM16Q9HAZ2 1276 aa7.48□□□□□ -1.21
PCNX1-205ENST00000553508 TMEM45AQ9NWC5 275 aa7.48□□□□□ -1.21
PCNX1-205ENST00000553508 UBE2J1Q9Y385 318 aaPredicted RBP7.48□□□□□ -1.21
PCNX1-205ENST00000553508 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.47□□□□□ -1.21
PCNX1-205ENST00000553508 DNPH1O43598 174 aa7.47□□□□□ -1.21
PCNX1-205ENST00000553508 ASNA1O43681 348 aa7.47□□□□□ -1.21
PCNX1-205ENST00000553508 KAT7O95251 611 aa7.47□□□□□ -1.21
PCNX1-205ENST00000553508 ENO1P06733 434 aaKnown RBP7.47□□□□□ -1.21
PCNX1-205ENST00000553508 NPPBP16860 134 aa7.47□□□□□ -1.21
PCNX1-205ENST00000553508 ANXA2RQ3ZCQ2 193 aa7.47□□□□□ -1.21
PCNX1-205ENST00000553508 FAM57BQ71RH2 274 aa7.47□□□□□ -1.21
PCNX1-205ENST00000553508 LAS2Q8IYD9 372 aa7.47□□□□□ -1.21
PCNX1-205ENST00000553508 ZNF366Q8N895 744 aa7.47□□□□□ -1.21
PCNX1-205ENST00000553508 STYXQ8WUJ0 223 aa7.47□□□□□ -1.21
PCNX1-205ENST00000553508 P2RY11Q96G91 374 aa7.47□□□□□ -1.21
PCNX1-205ENST00000553508 FAR2Q96K12 515 aa7.47□□□□□ -1.21
PCNX1-205ENST00000553508 MOV10Q9HCE1 1003 aaKnown RBP7.47□□□□□ -1.21
PCNX1-205ENST00000553508 TTC3P53804 2025 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 UGDHO60701 494 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 USP12O75317 370 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 HMGB1P09429 215 aaKnown RBP7.46□□□□□ -1.22
PCNX1-205ENST00000553508 SOX2P48431 317 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 SLC12A2P55011 1212 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 KRTAP1-1Q07627 177 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 ZNF260Q3ZCT1 412 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 DEF8Q6ZN54 512 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 IRF2BP2Q7Z5L9 587 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 UBE2Q1Q7Z7E8 422 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 MORC1Q86VD1 984 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 ZNF548Q8NEK5 533 aaPredicted RBP7.46□□□□□ -1.22
PCNX1-205ENST00000553508 WIPF2Q8TF74 440 aaPredicted RBP7.46□□□□□ -1.22
PCNX1-205ENST00000553508 KAT2BQ92831 832 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 TMEM41AQ96HV5 264 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 PAAF1Q9BRP4 392 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 ABHD14AQ9BUJ0 271 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 SLC52A1Q9NWF4 448 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 IPO11Q9UI26 975 aaKnown RBP7.46□□□□□ -1.22
PCNX1-205ENST00000553508 RAB21Q9UL25 225 aa7.46□□□□□ -1.22
PCNX1-205ENST00000553508 RPP40O75818 363 aaKnown RBP7.45□□□□□ -1.22
PCNX1-205ENST00000553508 TNFRSF6BO95407 300 aa7.45□□□□□ -1.22
PCNX1-205ENST00000553508 TMEM191BP0C7N4 346 aa7.45□□□□□ -1.22
PCNX1-205ENST00000553508 AKR1A1P14550 325 aa7.45□□□□□ -1.22
PCNX1-205ENST00000553508 KRTAP10-11P60412 298 aa7.45□□□□□ -1.22
PCNX1-205ENST00000553508 DMWDQ09019 674 aa7.45□□□□□ -1.22
PCNX1-205ENST00000553508 MTX1Q13505 466 aa7.45□□□□□ -1.22
PCNX1-205ENST00000553508 WDR93Q6P2C0 686 aa7.45□□□□□ -1.22
PCNX1-205ENST00000553508 NOL8Q76FK4 1167 aaKnown RBP7.45□□□□□ -1.22
PCNX1-205ENST00000553508 ZNF527Q8NB42 609 aa7.45□□□□□ -1.22
PCNX1-205ENST00000553508 WDR60Q8WVS4 1066 aa7.45□□□□□ -1.22
PCNX1-205ENST00000553508 CCDC134Q9H6E4 229 aa7.45□□□□□ -1.22
PCNX1-205ENST00000553508 OBP2BQ9NPH6 170 aa7.45□□□□□ -1.22
PCNX1-205ENST00000553508 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.45□□□□□ -1.22
PCNX1-205ENST00000553508 EMSYQ7Z589 1322 aa7.45□□□□□ -1.22
PCNX1-205ENST00000553508 KIF28PB7ZC32 967 aa7.44□□□□□ -1.22
PCNX1-205ENST00000553508 FFAR2O15552 330 aa7.44□□□□□ -1.22
PCNX1-205ENST00000553508 TFEBP19484 476 aa7.44□□□□□ -1.22
PCNX1-205ENST00000553508 IL6STP40189 918 aaPredicted RBP7.44□□□□□ -1.22
PCNX1-205ENST00000553508 CCT4P50991 539 aaKnown RBP7.44□□□□□ -1.22
PCNX1-205ENST00000553508 SLC37A1P57057 533 aa7.44□□□□□ -1.22
PCNX1-205ENST00000553508 AAK1Q2M2I8 961 aa7.44□□□□□ -1.22
PCNX1-205ENST00000553508 GLE1Q53GS7 698 aaKnown RBP7.44□□□□□ -1.22
PCNX1-205ENST00000553508 TRABD2AQ86V40 505 aa7.44□□□□□ -1.22
PCNX1-205ENST00000553508 GATAD2AQ86YP4 633 aa7.44□□□□□ -1.22
PCNX1-205ENST00000553508 ARL14EPQ8N8R7 260 aaPredicted RBP7.44□□□□□ -1.22
PCNX1-205ENST00000553508 Q8N9P0 234 aaPredicted RBP7.44□□□□□ -1.22
PCNX1-205ENST00000553508 SRFBP1Q8NEF9 429 aaKnown RBP7.44□□□□□ -1.22
PCNX1-205ENST00000553508 REXO5Q96IC2 774 aaKnown RBP7.44□□□□□ -1.22
PCNX1-205ENST00000553508 LRCH1Q9Y2L9 728 aa7.44□□□□□ -1.22
PCNX1-205ENST00000553508 HS3ST3B1Q9Y662 390 aa7.44□□□□□ -1.22
PCNX1-205ENST00000553508 LOC105369274A0A096LPK9 316 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 LOC102723532A0A0G2JNH3 316 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 GXYLT2A0PJZ3 443 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 CNOT3O75175 753 aaKnown RBP7.43□□□□□ -1.22
PCNX1-205ENST00000553508 RFPL3SP0C7P2 107 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 ME1P48163 572 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 RNASELQ05823 741 aaKnown RBP7.43□□□□□ -1.22
PCNX1-205ENST00000553508 LAMB3Q13751 1172 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 LIPMQ5VYY2 423 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 PIP4P1Q86T03 277 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 NRSN1Q8IZ57 195 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 OR4N4Q8N0Y3 316 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 BCAS4Q8TDM0 211 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 ZFYVE19Q96K21 471 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 KCNK9Q9NPC2 374 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 TRPC5Q9UL62 973 aaPredicted RBP7.43□□□□□ -1.22
PCNX1-205ENST00000553508 SLC12A4Q9UP95 1085 aa7.43□□□□□ -1.22
PCNX1-205ENST00000553508 LY6G6EA0A0G2JKS1 128 aa7.42□□□□□ -1.22
PCNX1-205ENST00000553508 LGALS16A8MUM7 142 aa7.42□□□□□ -1.22
PCNX1-205ENST00000553508 NKX2-8O15522 239 aa7.42□□□□□ -1.22
PCNX1-205ENST00000553508 SETSIPP0DME0 302 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms