RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 GGA2Q9UJY4 613 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 GOLGA4Q13439 2230 aaKnown RBP9.49□□□□□ -0.89
SYNE2-209ENST00000553308 COL5A1P20908 1838 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-209ENST00000553308 LAMA5O15230 3695 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 GCN1Q92616 2671 aaKnown RBP9.48□□□□□ -0.89
SYNE2-209ENST00000553308 A0A1B0GTQ1 180 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 FAM47DPA6NHR8 397 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 E9PAM4 449 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 PDXKO00764 312 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 ENC1O14682 589 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 DNTTP04053 509 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 PABPC1P11940 636 aaKnown RBP9.48□□□□□ -0.89
SYNE2-209ENST00000553308 TKTL1P51854 596 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 BCAT1P54687 386 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 C19orf57Q0VDD7 668 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 DNAJC3Q13217 504 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 INAVAQ3KP66 663 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 TTC31Q49AM3 519 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-209ENST00000553308 RAB41Q5JT25 222 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 FOXD4L5Q5VV16 416 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-209ENST00000553308 MBLAC2Q68D91 279 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 ZNF776Q68DI1 518 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-209ENST00000553308 KIAA0895LQ68EN5 471 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 BHLHA9Q7RTU4 235 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 KIAA0907Q7Z7F0 614 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-209ENST00000553308 TMPRSS12Q86WS5 348 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 FMNL3Q8IVF7 1028 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 ARHGAP18Q8N392 663 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.48□□□□□ -0.89
SYNE2-209ENST00000553308 FOXD4L4Q8WXT5 416 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-209ENST00000553308 SLC39A7Q92504 469 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 HEXIM2Q96MH2 286 aaKnown RBP9.48□□□□□ -0.89
SYNE2-209ENST00000553308 ZNF396Q96N95 335 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-209ENST00000553308 ACE2Q9BYF1 805 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-209ENST00000553308 ULBP1Q9BZM6 244 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 FBRSQ9HAH7 460 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 SGK2Q9HBY8 427 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 SERGEFQ9UGK8 458 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 SFMBT1Q9UHJ3 866 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 SERTAD1Q9UHV2 236 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 PLA2G4CQ9UP65 541 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 FRMD4BQ9Y2L6 1034 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 RAI2Q9Y5P3 530 aa9.48□□□□□ -0.89
SYNE2-209ENST00000553308 CABIN1Q9Y6J0 2220 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 SHROOM3Q8TF72 1996 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 A0A1W2PPC4 97 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 TULP2O00295 520 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 VILLO15195 856 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 ATXN7O15265 892 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 MSI1O43347 362 aaKnown RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 ACTN4O43707 911 aaKnown RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 ZBED1O96006 694 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 WNT1P04628 370 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 DLDP09622 509 aaKnown RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 JUPP14923 745 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 CD70P32970 193 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 HNF1BP35680 557 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 EIF2S3P41091 472 aaKnown RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 HARS2P49590 506 aaKnown RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 RAD23BP54727 409 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 C21orf59P57076 290 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 RACK1P63244 317 aaKnown RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 SEMG2Q02383 582 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 ZBTB16Q05516 673 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 PDE4CQ08493 712 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 SHBQ15464 509 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 FOXD4L6Q3SYB3 417 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 C6orf118Q5T5N4 469 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 HES3Q5TGS1 186 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 RESP18Q5W5W9 173 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 FOXD4L3Q6VB84 417 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 AHI1Q8N157 1196 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 SLC4A11Q8NBS3 891 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 EDEM1Q92611 657 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 TMA16Q96EY4 203 aaKnown RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 INTS4Q96HW7 963 aaKnown RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 CNDP2Q96KP4 475 aaKnown RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 ELF4Q99607 663 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 PABPC3Q9H361 631 aaKnown RBP9.47□□□□□ -0.89
SYNE2-209ENST00000553308 PRORYQ9H606 182 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 EBF2Q9HAK2 575 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 FAM13BQ9NYF5 915 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 PCDHA7Q9UN72 937 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 PCDHGA1Q9Y5H4 931 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 KNL1Q8NG31 2342 aa9.47□□□□□ -0.89
SYNE2-209ENST00000553308 ASXL3Q9C0F0 2248 aa9.46□□□□□ -0.89
SYNE2-209ENST00000553308 A0A1W2PP55 124 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 TK2O00142 265 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 WNT9AO14904 365 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 MAPK13O15264 365 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 DFNA5O60443 496 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 RFPL3O75679 317 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 LDOC1O95751 146 aaPredicted RBP9.46□□□□□ -0.9
SYNE2-209ENST00000553308 ATP5BP06576 529 aaKnown RBP9.46□□□□□ -0.9
SYNE2-209ENST00000553308 ITGAVP06756 1048 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 PDIA4P13667 645 aaKnown RBP9.46□□□□□ -0.9
SYNE2-209ENST00000553308 ABCB4P21439 1286 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 NR2F2P24468 414 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 ME1P48163 572 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 ACADVLP49748 655 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms