RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CALCAP01258 141 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 FYNP06241 537 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 H2AFZP0C0S5 128 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 HOXA6P31267 233 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 CXCL12P48061 93 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 PGFP49763 221 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 GALK1P51570 392 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 NME3Q13232 169 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 CCINQ13939 588 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 PIGHQ14442 188 aaPredicted RBP10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 PON2Q15165 354 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 EOGTQ5NDL2 527 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 CCDC122Q5T0U0 273 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 PIK3R6Q5UE93 754 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 SYPL2Q5VXT5 272 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 HGSNATQ68CP4 663 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 PLEKHA7Q6IQ23 1121 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 TPGS1Q6ZTW0 290 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 H2AFVQ71UI9 128 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 ANKS1BQ7Z6G8 1248 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 CHSY1Q86X52 802 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 TMEM25Q86YD3 366 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 C1orf210Q8IVY1 113 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 RHOT2Q8IXI1 618 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 CCDC105Q8IYK2 499 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 CAMKK1Q8N5S9 505 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 NDRG1Q92597 394 aaKnown RBP10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 KHSRPQ92945 711 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 ZNF653Q96CK0 615 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 FCRL2Q96LA5 508 aaPredicted RBP10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 RBSNQ9H1K0 784 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 FBRSQ9HAH7 460 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 DNAJC17Q9NVM6 304 aaKnown RBP10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 CNOT8Q9UFF9 292 aaKnown RBP10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 FBXO10Q9UK96 956 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 NDRG2Q9UN36 371 aaKnown RBP10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 PLA2G4CQ9UP65 541 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 STARD13Q9Y3M8 1113 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 KIF26AQ9ULI4 1882 aaPredicted RBP10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 MUC3AQ02505 3323 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 A0A1B0GVM2 712 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 TCAF2A6NFQ2 919 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 MYO1FO00160 1098 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 MSI1O43347 362 aaKnown RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 TULP3O75386 442 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 GRAP2O75791 330 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 LUC7L3O95232 432 aaKnown RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 KLKB1P03952 638 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 ASLP04424 464 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 CHRNB1P11230 501 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 TARSP26639 723 aaKnown RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 CNR2P34972 360 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 NNMTP40261 264 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 DGKEP52429 567 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 NRG1Q02297 640 aaPredicted RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 ZNF177Q13360 481 aaPredicted RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 EIF4EBP2Q13542 120 aaPredicted RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 CDH18Q13634 790 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 ZC3H12AQ5D1E8 599 aaKnown RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 MS4A13Q5J8X5 152 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 EFHC2Q5JST6 749 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 ZNF783Q6ZMS7 281 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 CHST9Q7L1S5 443 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 METTL3Q86U44 580 aaKnown RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 C11orf74Q86VG3 221 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 ETFBKMTQ8IXQ9 262 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 AHI1Q8N157 1196 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 TERB1Q8NA31 727 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 KDM1BQ8NB78 822 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 FIBINQ8TAL6 211 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 RXFP2Q8WXD0 754 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 CENPIQ92674 756 aaPredicted RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 NTAN1Q96AB6 310 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 PCDHB18PQ96TA0 734 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 OSBPL2Q9H1P3 480 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 METTL5Q9NRN9 209 aaKnown RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 SPATA6Q9NWH7 488 aaPredicted RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 ARHGEF38Q9NXL2 777 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 KIAA1522Q9P206 1035 aaPredicted RBP10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 STIM2Q9P246 746 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 IP6K2Q9UHH9 426 aa10.63□□□□□ -0.71
TRAFD1-208ENST00000552890 H0Y626 953 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 DDX3XO00571 662 aaKnown RBP eCLIP10.62□□□□□ -0.713e-8■■■□□ 18.8
TRAFD1-208ENST00000552890 PRPSAP2O60256 369 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 MOCS2O96007 188 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 SKILP12757 684 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 TACR2P21452 398 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 RRM1P23921 792 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 PCK1P35558 622 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 ARHGAP25P42331 645 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 CDH4P55283 916 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 GEMIN4P57678 1058 aaKnown RBP10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 ST8SIA6P61647 398 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 KRT83P78385 493 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 PTP4A2Q12974 167 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 TBX2Q13207 712 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 MAMLD1Q13495 774 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 STARD3Q14849 445 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 TAF5Q15542 800 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms