RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ZZEF1O43149 2961 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 BEST1O76090 585 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 ZBED1O96006 694 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 CKMP06732 381 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 RALAP11233 206 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 ENGP17813 658 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 P2RY2P41231 377 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 MAPK8P45983 427 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 KIF11P52732 1056 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 NOMO3P69849 1222 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 SIM1P81133 766 aaPredicted RBP11.88□□□□□ -0.51
TMEM116-218ENST00000552839 LMAN2Q12907 356 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 CRY1Q16526 586 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 GAB4Q2WGN9 574 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 CCDC122Q5T0U0 273 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 PMF1Q6P1K2 205 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 MMS22LQ6ZRQ5 1243 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 PIP4P1Q86T03 277 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 TADA2BQ86TJ2 420 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 TXLNBQ8N3L3 684 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 CCDC26Q8TAB7 109 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 TRMT2BQ96GJ1 504 aaKnown RBP11.88□□□□□ -0.51
TMEM116-218ENST00000552839 MYRFLQ96LU7 910 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 ZSWIM1Q9BR11 485 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 NUSAP1Q9BXS6 441 aaKnown RBP11.88□□□□□ -0.51
TMEM116-218ENST00000552839 ULBP1Q9BZM6 244 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 UBXN6Q9BZV1 441 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 NHEJ1Q9H9Q4 299 aaPredicted RBP11.88□□□□□ -0.51
TMEM116-218ENST00000552839 CYLDQ9NQC7 956 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 TLR8Q9NR97 1041 aaKnown RBP11.88□□□□□ -0.51
TMEM116-218ENST00000552839 ADAM22Q9P0K1 906 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 ADAMTS1Q9UHI8 967 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 NAGPAQ9UK23 515 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 CACNA1EQ15878 2313 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 FASNP49327 2511 aaKnown RBP11.88□□□□□ -0.51
TMEM116-218ENST00000552839 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 TULP2O00295 520 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 TNFRSF10BO14763 440 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 CAPNS1P04632 268 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 PLEKP08567 350 aaPredicted RBP11.87□□□□□ -0.51
TMEM116-218ENST00000552839 TCF3P15923 654 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 HNRNPH3P31942 346 aaKnown RBP11.87□□□□□ -0.51
TMEM116-218ENST00000552839 PTGER3P43115 390 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 GPD2P43304 727 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 PPP3CCP48454 512 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 ZXDBP98169 803 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 CENPCQ03188 943 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 SEMA3BQ13214 749 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 FAM102AQ5T9C2 384 aaPredicted RBP11.87□□□□□ -0.51
TMEM116-218ENST00000552839 BTBD8Q5XKL5 378 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 DNAJC24Q6P3W2 148 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 ARMCX6Q7L4S7 300 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 LPCAT2Q7L5N7 544 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 GPRIN1Q7Z2K8 1008 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 SYT12Q8IV01 421 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 SFTPA1Q8IWL2 248 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 TMEFF1Q8IYR6 380 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 ZMIZ2Q8NF64 920 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 SCAMP5Q8TAC9 235 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 SLC30A5Q8TAD4 765 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 STK32AQ8WU08 396 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 RNF139Q8WU17 664 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 SLC35F5Q8WV83 523 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 KCTD13Q8WZ19 329 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 ZNF653Q96CK0 615 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 C18orf8Q96DM3 657 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 CNGB3Q9NQW8 809 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 GMIPQ9P107 970 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 ARHGAP20Q9P2F6 1191 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 WDR35Q9P2L0 1181 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 MBD1Q9UIS9 605 aaPredicted RBP11.87□□□□□ -0.51
TMEM116-218ENST00000552839 ZFYVE26Q68DK2 2539 aa11.87□□□□□ -0.51
TMEM116-218ENST00000552839 PLXNB3Q9ULL4 1909 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 MAP3K13O43283 966 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 RTN2O75298 545 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 NFATC1O95644 943 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 CYP1A1P04798 512 aaPredicted RBP11.86□□□□□ -0.51
TMEM116-218ENST00000552839 CHRM1P11229 460 aaPredicted RBP11.86□□□□□ -0.51
TMEM116-218ENST00000552839 CHRNB2P17787 502 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 HDCP19113 662 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 ABCB4P21439 1286 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 PSEN1P49768 467 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 FAM193AP78312 1265 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 MRPS21P82921 87 aaKnown RBP11.86□□□□□ -0.51
TMEM116-218ENST00000552839 CDK17Q00537 523 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
TMEM116-218ENST00000552839 MESP2Q0VG99 397 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 TAF10Q12962 218 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 MAPK8IP2Q13387 824 aaPredicted RBP11.86□□□□□ -0.51
TMEM116-218ENST00000552839 ARID5BQ14865 1188 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 PTPN20Q4JDL3 420 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 PKDCCQ504Y2 493 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 HGSNATQ68CP4 663 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 ACAD10Q6JQN1 1059 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 ALKBH5Q6P6C2 394 aaKnown RBP11.86□□□□□ -0.51
TMEM116-218ENST00000552839 SLC23A3Q6PIS1 610 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 ZDHHC17Q8IUH5 632 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 CCDC170Q8IYT3 715 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 CHCHD4Q8N4Q1 142 aa11.86□□□□□ -0.51
TMEM116-218ENST00000552839 ALLCQ8N6M5 410 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms