RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 TMEM174Q8WUU8 243 aa9.1□□□□□ -0.95
TMEM116-217ENST00000552801 GATA6Q92908 595 aa9.1□□□□□ -0.95
TMEM116-217ENST00000552801 PLD4Q96BZ4 506 aa9.1□□□□□ -0.95
TMEM116-217ENST00000552801 TMEM176AQ96HP8 235 aa9.1□□□□□ -0.95
TMEM116-217ENST00000552801 TWNKQ96RR1 684 aa9.1□□□□□ -0.95
TMEM116-217ENST00000552801 SLC2A11Q9BYW1 496 aa9.1□□□□□ -0.95
TMEM116-217ENST00000552801 OSER1Q9NX31 292 aa9.1□□□□□ -0.95
TMEM116-217ENST00000552801 ELOVL2Q9NXB9 296 aa9.1□□□□□ -0.95
TMEM116-217ENST00000552801 RCOR1Q9UKL0 485 aa9.1□□□□□ -0.95
TMEM116-217ENST00000552801 TRAF3IP3Q9Y228 551 aa9.1□□□□□ -0.95
TMEM116-217ENST00000552801 SLC27A6Q9Y2P4 619 aa9.1□□□□□ -0.95
TMEM116-217ENST00000552801 SYCE3A1L190 88 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 GOLGA6L4A6NEF3 574 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 ZBED1O96006 694 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 ATP5BP06576 529 aaKnown RBP9.09□□□□□ -0.95
TMEM116-217ENST00000552801 CISD3P0C7P0 127 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 FTH1P19P0C7X4 201 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 IL12RB1P42701 662 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 TPMTP51580 245 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 TKTL1P51854 596 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 BCAT1P54687 386 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 ENPEPQ07075 957 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 ZNF234Q14588 700 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 GEN1Q17RS7 908 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 INAVAQ3KP66 663 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 TTC31Q49AM3 519 aaPredicted RBP9.09□□□□□ -0.95
TMEM116-217ENST00000552801 SGO2Q562F6 1265 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 Q6ZNB5 142 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 ZNF276Q8N554 614 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 ZNF557Q8N988 423 aaPredicted RBP9.09□□□□□ -0.95
TMEM116-217ENST00000552801 WFIKKN2Q8TEU8 576 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 SKA1Q96BD8 255 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 CDC6Q99741 560 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 ARID3AQ99856 593 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 TSPY26PQ9H489 355 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 GAREM1Q9H706 876 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 APOBEC3GQ9HC16 384 aaKnown RBP9.09□□□□□ -0.95
TMEM116-217ENST00000552801 ITM2CQ9NQX7 267 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 CISHQ9NSE2 258 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 RMND1Q9NWS8 449 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 WSB2Q9NYS7 404 aaPredicted RBP9.09□□□□□ -0.95
TMEM116-217ENST00000552801 THAP10Q9P2Z0 257 aaPredicted RBP9.09□□□□□ -0.95
TMEM116-217ENST00000552801 AGO1Q9UL18 857 aaKnown RBP9.09□□□□□ -0.95
TMEM116-217ENST00000552801 NCKAP1Q9Y2A7 1128 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 NFE2L3Q9Y4A8 694 aa9.09□□□□□ -0.95
TMEM116-217ENST00000552801 PCNX2A6NKB5 2137 aa9.09□□□□□ -0.96
TMEM116-217ENST00000552801 EIF4E1BA6NMX2 242 aaKnown RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 HHLA1C9JL84 531 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 TSPAN3O60637 253 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 RNASEH1O60930 286 aaKnown RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 RHOBTB3O94955 611 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 LETM1O95202 739 aaPredicted RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 PENKP01210 267 aaPredicted RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 DNTTP04053 509 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 CD59P13987 128 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 AFF3P51826 1226 aaKnown RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 ST8SIA6P61647 398 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 UBE2HP62256 183 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 PPP3CAQ08209 521 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 CETN1Q12798 172 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 NFIL3Q16649 462 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 GOLGA7BQ2TAP0 167 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 CCDC157Q569K6 752 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 CCDC183Q5T5S1 534 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 FYB2Q5VWT5 728 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 SCD5Q86SK9 330 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 PIGZQ86VD9 579 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 FMNL3Q8IVF7 1028 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 CPXM2Q8N436 756 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 GUF1Q8N442 669 aaKnown RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 ANKRD52Q8NB46 1076 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 OR2T3Q8NH03 318 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 RHBDD1Q8TEB9 315 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 TMA16Q96EY4 203 aaKnown RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 FAXDC2Q96IV6 333 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 CAMK1GQ96NX5 476 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 DDX50Q9BQ39 737 aaKnown RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 USB1Q9BQ65 265 aaKnown RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 UBXN6Q9BZV1 441 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 SCAND2PQ9GZW5 306 aaPredicted RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 LHX5Q9H2C1 402 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 CCDC86Q9H6F5 360 aaKnown RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 FBRSQ9HAH7 460 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 TM7SF3Q9NS93 570 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 RAB20Q9NX57 234 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 EIF2B4Q9UI10 523 aaKnown RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 HOOK1Q9UJC3 728 aaKnown RBP9.08□□□□□ -0.96
TMEM116-217ENST00000552801 ZKSCAN5Q9Y2L8 839 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 CEP83Q9Y592 693 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 USP3Q9Y6I4 520 aa9.08□□□□□ -0.96
TMEM116-217ENST00000552801 LAMA1P25391 3075 aa9.07□□□□□ -0.96
TMEM116-217ENST00000552801 METTL12A8MUP2 240 aa9.07□□□□□ -0.96
TMEM116-217ENST00000552801 RNF223E7ERA6 249 aa9.07□□□□□ -0.96
TMEM116-217ENST00000552801 FLRT2O43155 660 aa9.07□□□□□ -0.96
TMEM116-217ENST00000552801 GREM1O60565 184 aa9.07□□□□□ -0.96
TMEM116-217ENST00000552801 KLKB1P03952 638 aa9.07□□□□□ -0.96
TMEM116-217ENST00000552801 POLR2EP19388 210 aaKnown RBP9.07□□□□□ -0.96
TMEM116-217ENST00000552801 PRKCHP24723 683 aa9.07□□□□□ -0.96
TMEM116-217ENST00000552801 SLC11A2P49281 568 aa9.07□□□□□ -0.96
TMEM116-217ENST00000552801 C21orf59P57076 290 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms