RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	CAPZA2	P47755	286 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	SLC9A3	P48764	834 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	ASIC1	P78348	528 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	CREB5	Q02930	508 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	ALX1	Q15699	326 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	SYT16	Q17RD7	645 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	PAGE2B	Q5JRK9	111 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	GNAS	Q5JWF2	1037 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	LIN9	Q5TKA1	542 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	TIGD7	Q6NT04	549 aa	Predicted RBP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	LAYN	Q6UX15	382 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	OTOA	Q7RTW8	1153 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	SZRD1	Q7Z422	152 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	RABEPK	Q7Z6M1	372 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	KBTBD6	Q86V97	674 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	LONP2	Q86WA8	852 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	FAM131B	Q86XD5	332 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	TMEM145	Q8NBT3	493 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	NSMCE1	Q8WV22	266 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	TRAPPC12	Q8WVT3	735 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	MUL1	Q969V5	352 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	NMD3	Q96D46	503 aa	Known RBP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	C7orf34	Q96L11	122 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	COQ10B	Q9H8M1	238 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	SP110	Q9HB58	689 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	CHMP1A	Q9HD42	196 aa	Predicted RBP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	NRIP3	Q9NQ35	241 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	CYP26B1	Q9NR63	512 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	DDX43	Q9NXZ2	648 aa	Known RBP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	HCN2	Q9UL51	889 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	ENTPD4	Q9Y227	616 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	TLR6	Q9Y2C9	796 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	DMRT1	Q9Y5R6	373 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	C5orf51	A6NDU8	294 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	BTBD17	A6NE02	478 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	FADS2P1	A8MWK0	482 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	ACKR2	O00590	384 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	EIF3D	O15371	548 aa	Known RBP eCLIP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	CSH1	P0DML2	217 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	CSH2	P0DML3	217 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	MYL6B	P14649	208 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	M6PR	P20645	277 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	TRHR	P34981	398 aa	Predicted RBP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	RGS7	P49802	495 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	NME5	P56597	212 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	CYP27A1	Q02318	531 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	GLO1	Q04760	184 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	GFPT1	Q06210	699 aa	Predicted RBP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	GPR176	Q14439	515 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	TSC22D1	Q15714	1073 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	CHRNA6	Q15825	494 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	CCDC85B	Q15834	202 aa	Predicted RBP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	PRR16	Q569H4	304 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	DGKK	Q5KSL6	1271 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	C12orf60	Q5U649	245 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	FOXR1	Q6PIV2	292 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	CHSY3	Q70JA7	882 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	HTR3D	Q70Z44	454 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	CHST15	Q7LFX5	561 aa	Predicted RBP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	NXPE1	Q8N323	547 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	ZNF680	Q8NEM1	530 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	MAGEC3	Q8TD91	643 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	DTD1	Q8TEA8	209 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	SLC44A1	Q8WWI5	657 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	FAM122A	Q96E09	287 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	ZNF560	Q96MR9	790 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	OR1F2P	Q96R84	312 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	MOV10L1	Q9BXT6	1211 aa	Known RBP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	WNT8A	Q9H1J5	351 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	RUBCNL	Q9H714	662 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	JMJD4	Q9H9V9	463 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	SCUBE2	Q9NQ36	999 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	GJB4	Q9NTQ9	266 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	RMND1	Q9NWS8	449 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	SMPD3	Q9NY59	655 aa	Predicted RBP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	DLGAP4	Q9Y2H0	992 aa		4	□□□□□ -1.77
CNOT2-231	ENST00000551483	TNPO3	Q9Y5L0	923 aa	Known RBP	4	□□□□□ -1.77
CNOT2-231	ENST00000551483	TRAV20	A0A0B4J274	112 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	POM121B	A6NF01	834 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	PHACTR2	O75167	634 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	GCNT3	O95395	438 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	ADH1C	P00326	375 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	MLN	P12872	115 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	FGFR2	P21802	821 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	CALB2	P22676	271 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	SLC12A1	Q13621	1099 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	PMS2P11	Q13670	270 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	SPCS2	Q15005	226 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	KLHL40	Q2TBA0	621 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	LCN1P1	Q5VSP4	162 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	NAA35	Q5VZE5	725 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	TRAT1	Q6PIZ9	186 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	SARM1	Q6SZW1	724 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	SLC36A4	Q6YBV0	504 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	MSANTD1	Q6ZTZ1	278 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	FANCB	Q8NB91	859 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	SIMC1	Q8NDZ2	872 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	BPIFC	Q8NFQ6	507 aa		3.99	□□□□□ -1.77
CNOT2-231	ENST00000551483	OR10Z1	Q8NGY1	313 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms