RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-208ENST00000551009 EBF3Q9H4W6 596 aa5.31□□□□□ -1.56
ATP2B1-208ENST00000551009 ZMYND8Q9ULU4 1186 aaPredicted RBP5.31□□□□□ -1.56
ATP2B1-208ENST00000551009 CA14Q9ULX7 337 aa5.31□□□□□ -1.56
ATP2B1-208ENST00000551009 MAN2B2Q9Y2E5 1009 aa5.31□□□□□ -1.56
ATP2B1-208ENST00000551009 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 TTC34A8MYJ7 566 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 HNRNPDLO14979 420 aaKnown RBP5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 ZSCAN9O15535 394 aaPredicted RBP5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 TLR2O60603 784 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 CNOT3O75175 753 aaKnown RBP5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 RNASEH2AO75792 299 aaKnown RBP5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 VDRP11473 427 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 THBS4P35443 961 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 CCT5P48643 541 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 WDR5P61964 334 aaKnown RBP5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 RPS13P62277 151 aaKnown RBP5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 SRSF1Q07955 248 aaKnown RBP eCLIP5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 MAPKAPK3Q16644 382 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 FAM209BQ5JX69 171 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 HYIQ5T013 277 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 HIBCHQ6NVY1 386 aaPredicted RBP5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 PRR11Q96HE9 360 aaPredicted RBP5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 MPP4Q96JB8 637 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 VCPIP1Q96JH7 1222 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 TNIP3Q96KP6 325 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 PCDHAC1Q9H158 963 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 SAP30LQ9HAJ7 183 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 NLRC4Q9NPP4 1024 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 RGL1Q9NZL6 768 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 PGAP2Q9UHJ9 254 aa5.3□□□□□ -1.56
ATP2B1-208ENST00000551009 VIPP01282 170 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 CD63P08962 238 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 TMEM191BP0C7N4 346 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 CTSAP10619 480 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 TKTP29401 623 aaKnown RBP5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 CCKBRP32239 447 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 GEMIN4P57678 1058 aaKnown RBP5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 ID2Q02363 134 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 NSUN2Q08J23 767 aaKnown RBP eCLIP5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 CHAF1AQ13111 956 aaPredicted RBP5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 SEMA3BQ13214 749 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 SLC4A8Q2Y0W8 1093 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 KLHL22Q53GT1 634 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 RUSC1-AS1Q66K80 236 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 RAP1GAP2Q684P5 730 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 ZDHHC17Q8IUH5 632 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 TXLNBQ8N3L3 684 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 SKA1Q96BD8 255 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 RSPH9Q9H1X1 276 aaPredicted RBP5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 NECTIN3Q9NQS3 549 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 TM7SF3Q9NS93 570 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 GJB4Q9NTQ9 266 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 ABHD10Q9NUJ1 306 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 POLG2Q9UHN1 485 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 ZNF580Q9UK33 172 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 RABGAP1Q9Y3P9 1069 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 SIRT4Q9Y6E7 314 aaPredicted RBP5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 ZMYM2Q9UBW7 1377 aa5.29□□□□□ -1.56
ATP2B1-208ENST00000551009 SPATA31A5Q5VU36 1347 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 SPATA31A7Q8IWB4 1347 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 RASA4BC9J798 803 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 RASA4O43374 803 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 CYP19A1P11511 503 aaPredicted RBP5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 TNFSF4P23510 183 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 HOXD12P35452 270 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 IGHMBP2P38935 993 aaKnown RBP5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 AK2P54819 239 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 ZNF91Q05481 1191 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 CNGA3Q16281 694 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 TMEM196Q5HYL7 178 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 EARS2Q5JPH6 523 aaKnown RBP5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 IZUMO3Q5VZ72 239 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 ACSM6Q6P461 480 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 C1orf228Q6PIY5 440 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 RINLQ6ZS11 566 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 FAM43BQ6ZT52 329 aaPredicted RBP5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 PIP4P1Q86T03 277 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 FAM186BQ8IYM0 893 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 GLIS1Q8NBF1 620 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 ACRBPQ8NEB7 543 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 VPS37AQ8NEZ2 397 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 GRAMD1AQ96CP6 724 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 ARL8BQ9NVJ2 186 aa5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 NOL7Q9UMY1 257 aaKnown RBP5.28□□□□□ -1.56
ATP2B1-208ENST00000551009 INPPL1O15357 1258 aa5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 NDST3O95803 873 aa5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 SETSIPP0DME0 302 aa5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 DRD1P21728 446 aa5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 RAE1P78406 368 aaKnown RBP5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 STIM1Q13586 685 aa5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 PDE1CQ14123 709 aaPredicted RBP5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 SLC9C1Q4G0N8 1177 aa5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 ARL6IP4Q66PJ3 421 aaKnown RBP5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 CCDC144NLQ6NUI1 221 aa5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 OR2C3Q8N628 320 aa5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 OR52L2PQ8NGH6 319 aa5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 NSMCE1Q8WV22 266 aa5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 GLMPQ8WWB7 406 aa5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 TBATAQ96M53 351 aa5.27□□□□□ -1.57
ATP2B1-208ENST00000551009 RIPOR3Q96MK2 946 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms