RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 GTF2H1P32780 548 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 SYKP43405 635 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 CSNK1EP49674 416 aaKnown RBP13.14□□□□□ -0.31
LETMD1-222ENST00000550274 SGSHP51688 502 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 PDE4CQ08493 712 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 ACAP1Q15027 740 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 GOLGA7BQ2TAP0 167 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 MPPE1Q53F39 396 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 LAYNQ6UX15 382 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 DBX2Q6ZNG2 339 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 MARCH9Q86YJ5 346 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 HSCBQ8IWL3 235 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 ZC3H3Q8IXZ2 948 aaKnown RBP13.14□□□□□ -0.31
LETMD1-222ENST00000550274 TTC39CQ8N584 583 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 FBXL13Q8NEE6 735 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 SNX19Q92543 992 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 EDEM1Q92611 657 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 FAXDC2Q96IV6 333 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 LHX5Q9H2C1 402 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 TMEM245Q9H330 911 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 CCDC86Q9H6F5 360 aaKnown RBP13.14□□□□□ -0.31
LETMD1-222ENST00000550274 RAB20Q9NX57 234 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 SFMBT1Q9UHJ3 866 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 TSPAN16Q9UKR8 245 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 BTBD3Q9Y2F9 522 aa13.14□□□□□ -0.31
LETMD1-222ENST00000550274 COL5A1P20908 1838 aaPredicted RBP13.13□□□□□ -0.31
LETMD1-222ENST00000550274 ARID1BQ8NFD5 2236 aaPredicted RBP13.13□□□□□ -0.31
LETMD1-222ENST00000550274 XPO1O14980 1071 aaKnown RBP13.13□□□□□ -0.31
LETMD1-222ENST00000550274 MSI1O43347 362 aaKnown RBP13.13□□□□□ -0.31
LETMD1-222ENST00000550274 TIMM44O43615 452 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 DKK1O94907 266 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 C7P10643 843 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 ARID5AQ03989 594 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 ADIGQ0VDE8 80 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 E2F5Q15329 346 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 PTPRNQ16849 979 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 KIF19Q2TAC6 998 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 FNDC3BQ53EP0 1204 aaKnown RBP13.13□□□□□ -0.31
LETMD1-222ENST00000550274 IL27RAQ6UWB1 636 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 CHST9Q7L1S5 443 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 ADIPOR2Q86V24 386 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 SMYD4Q8IYR2 804 aaPredicted RBP13.13□□□□□ -0.31
LETMD1-222ENST00000550274 WFDC5Q8TCV5 224 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 CCDC47Q96A33 483 aaKnown RBP13.13□□□□□ -0.31
LETMD1-222ENST00000550274 SPATA32Q96LK8 384 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 PCED1AQ9H1Q7 454 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 ABCB8Q9NUT2 735 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 KIAA1522Q9P206 1035 aaPredicted RBP13.13□□□□□ -0.31
LETMD1-222ENST00000550274 STOML2Q9UJZ1 356 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.13□□□□□ -0.31
LETMD1-222ENST00000550274 HBS1LQ9Y450 684 aaKnown RBP13.13□□□□□ -0.31
LETMD1-222ENST00000550274 SNX11Q9Y5W9 270 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 ASXL3Q9C0F0 2248 aa13.13□□□□□ -0.31
LETMD1-222ENST00000550274 YJEFN3A6XGL0 299 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 E7ENQ6 273 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 FLRT2O43155 660 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 HARS2P49590 506 aaKnown RBP13.12□□□□□ -0.31
LETMD1-222ENST00000550274 AFF3P51826 1226 aaKnown RBP13.12□□□□□ -0.31
LETMD1-222ENST00000550274 BCAT1P54687 386 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 SLC8A3P57103 927 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 RPS14P62263 151 aaKnown RBP13.12□□□□□ -0.31
LETMD1-222ENST00000550274 COL28A1Q2UY09 1125 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 EDRF1Q3B7T1 1238 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 CBWD6Q4V339 395 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 CBWD3Q5JTY5 395 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 CBWD5Q5RIA9 395 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 BSPRYQ5W0U4 402 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 KRBA2Q6ZNG9 492 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 TMPRSS7Q7RTY8 843 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 KIAA0907Q7Z7F0 614 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-222ENST00000550274 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.12□□□□□ -0.31
LETMD1-222ENST00000550274 RHBDD1Q8TEB9 315 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 WFIKKN2Q8TEU8 576 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 BIRC7Q96CA5 298 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 GOLPH3LQ9H4A5 285 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 LRRC4Q9HBW1 653 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 TM9SF3Q9HD45 589 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 OLA1Q9NTK5 396 aaKnown RBP13.12□□□□□ -0.31
LETMD1-222ENST00000550274 GGA2Q9UJY4 613 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.12□□□□□ -0.31
LETMD1-222ENST00000550274 RAXQ9Y2V3 346 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 PCDHGB2Q9Y5G2 931 aa13.12□□□□□ -0.31
LETMD1-222ENST00000550274 KALRNO60229 2985 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 HELZ2Q9BYK8 2649 aaKnown RBP13.11□□□□□ -0.31
LETMD1-222ENST00000550274 GOLGA8CPA6NN73 597 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 KCNK3O14649 394 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 SEMA4FO95754 770 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 PABPC1P11940 636 aaKnown RBP13.11□□□□□ -0.31
LETMD1-222ENST00000550274 CD70P32970 193 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 BST2Q10589 180 aaKnown RBP13.11□□□□□ -0.31
LETMD1-222ENST00000550274 CUL2Q13617 745 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 SGO2Q562F6 1265 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 KCNT1Q5JUK3 1230 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 ADGRF1Q5T601 910 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 MBLAC2Q68D91 279 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 PDZD3Q86UT5 571 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 AHI1Q8N157 1196 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 UBA3Q8TBC4 463 aa13.11□□□□□ -0.31
LETMD1-222ENST00000550274 RNF139Q8WU17 664 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms