RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 MFAP3P55082 362 aa14□□□□□ -0.17
NUP188-211ENST00000550219 JAM2P57087 298 aa14□□□□□ -0.17
NUP188-211ENST00000550219 POLR2FP61218 127 aaKnown RBP14□□□□□ -0.17
NUP188-211ENST00000550219 YWHAEP62258 255 aaKnown RBP14□□□□□ -0.17
NUP188-211ENST00000550219 ZNF33AQ06730 810 aa14□□□□□ -0.17
NUP188-211ENST00000550219 BST2Q10589 180 aaKnown RBP14□□□□□ -0.17
NUP188-211ENST00000550219 TRIM14Q14142 442 aa14□□□□□ -0.17
NUP188-211ENST00000550219 STARD3Q14849 445 aa14□□□□□ -0.17
NUP188-211ENST00000550219 GEN1Q17RS7 908 aa14□□□□□ -0.17
NUP188-211ENST00000550219 FYB2Q5VWT5 728 aa14□□□□□ -0.17
NUP188-211ENST00000550219 SLC41A1Q8IVJ1 513 aa14□□□□□ -0.17
NUP188-211ENST00000550219 RGL4Q8IZJ4 473 aa14□□□□□ -0.17
NUP188-211ENST00000550219 SIX6OS1Q8N1H7 587 aa14□□□□□ -0.17
NUP188-211ENST00000550219 ANKRD52Q8NB46 1076 aa14□□□□□ -0.17
NUP188-211ENST00000550219 UBA3Q8TBC4 463 aa14□□□□□ -0.17
NUP188-211ENST00000550219 SHC3Q92529 594 aa14□□□□□ -0.17
NUP188-211ENST00000550219 BAP1Q92560 729 aa14□□□□□ -0.17
NUP188-211ENST00000550219 MRGPRX1Q96LB2 322 aa14□□□□□ -0.17
NUP188-211ENST00000550219 CIPCQ9C0C6 399 aa14□□□□□ -0.17
NUP188-211ENST00000550219 PILRBQ9UKJ0 227 aa14□□□□□ -0.17
NUP188-211ENST00000550219 AGO1Q9UL18 857 aaKnown RBP14□□□□□ -0.17
NUP188-211ENST00000550219 MYO6Q9UM54 1294 aa14□□□□□ -0.17
NUP188-211ENST00000550219 CAPN11Q9UMQ6 739 aa14□□□□□ -0.17
NUP188-211ENST00000550219 CNTN6Q9UQ52 1028 aa14□□□□□ -0.17
NUP188-211ENST00000550219 XPO1O14980 1071 aaKnown RBP13.99□□□□□ -0.17
NUP188-211ENST00000550219 ZBED1O96006 694 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 PENKP01210 267 aaPredicted RBP13.99□□□□□ -0.17
NUP188-211ENST00000550219 GYPCP04921 128 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 IL12RB1P42701 662 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 DUOXA1Q1HG43 343 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 RAB41Q5JT25 222 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 SPDYCQ5MJ68 293 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 SLC23A3Q6PIS1 610 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 TMC6Q7Z403 805 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 ANKS1BQ7Z6G8 1248 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 FMNL3Q8IVF7 1028 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 OR2I1PQ8NGU4 316 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 DDI1Q8WTU0 396 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 RNF139Q8WU17 664 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 UCMAQ8WVF2 138 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 EDEM1Q92611 657 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 PLD4Q96BZ4 506 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 CD248Q9HCU0 757 aa13.99□□□□□ -0.17
NUP188-211ENST00000550219 MEI4A8MW99 385 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 RNF225M0QZC1 329 aaPredicted RBP13.98□□□□□ -0.17
NUP188-211ENST00000550219 FOXN3O00409 490 aaPredicted RBP13.98□□□□□ -0.17
NUP188-211ENST00000550219 GFRA2O00451 464 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 PIK3R2O00459 728 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 MSI1O43347 362 aaKnown RBP13.98□□□□□ -0.17
NUP188-211ENST00000550219 TSPAN3O60637 253 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 LCP1P13796 627 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 CSRP1P21291 193 aaKnown RBP13.98□□□□□ -0.17
NUP188-211ENST00000550219 HOXD12P35452 270 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 RGS7P49802 495 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 SHC2P98077 582 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 ARID5AQ03989 594 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 GFPT1Q06210 699 aaPredicted RBP13.98□□□□□ -0.17
NUP188-211ENST00000550219 ARID5BQ14865 1188 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 DRAP1Q14919 205 aaPredicted RBP13.98□□□□□ -0.17
NUP188-211ENST00000550219 FUT11Q495W5 492 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 PEAR1Q5VY43 1037 aaPredicted RBP13.98□□□□□ -0.17
NUP188-211ENST00000550219 BHLHA9Q7RTU4 235 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 FAM71AQ8IYT1 594 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 HDDC3Q8N4P3 179 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 ZNF276Q8N554 614 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 SORCS1Q8WY21 1168 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 NLRC4Q9NPP4 1024 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 OLA1Q9NTK5 396 aaKnown RBP13.98□□□□□ -0.17
NUP188-211ENST00000550219 IMPACTQ9P2X3 320 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 SFMBT1Q9UHJ3 866 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 CLEC4EQ9ULY5 219 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 SLC6A14Q9UN76 642 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 SLC27A6Q9Y2P4 619 aa13.98□□□□□ -0.17
NUP188-211ENST00000550219 F8VZ95 297 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 O00370 1275 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 SYNCRIPO60506 623 aaKnown RBP13.97□□□□□ -0.17
NUP188-211ENST00000550219 TOP3BO95985 862 aaKnown RBP13.97□□□□□ -0.17
NUP188-211ENST00000550219 VDRP11473 427 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 CEACAM1P13688 526 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 PRKCHP24723 683 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 HARS2P49590 506 aaKnown RBP13.97□□□□□ -0.17
NUP188-211ENST00000550219 ZNF132P52740 706 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 ZBED6P86452 979 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 ZNF234Q14588 700 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 TMEM270Q6UE05 265 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 RABEPKQ7Z6M1 372 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 CPXM2Q8N436 756 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 MINDY1Q8N5J2 469 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 CEP76Q8TAP6 659 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 PDLIM2Q96JY6 352 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 UBXN6Q9BZV1 441 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 SLC32A1Q9H598 525 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 PRDM16Q9HAZ2 1276 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 FBXO10Q9UK96 956 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 LUC7L2Q9Y383 392 aaKnown RBP13.97□□□□□ -0.17
NUP188-211ENST00000550219 PCDHB4Q9Y5E5 795 aa13.97□□□□□ -0.17
NUP188-211ENST00000550219 SPAARA0A1B0GVQ0 90 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 YJEFN3A6XGL0 299 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 E7ENQ6 273 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 M0QYV0 167 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms