RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 TRIM24O15164 1050 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 CISD3P0C7P0 127 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 TDGF1P13385 188 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 HOXA6P31267 233 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 SLC6A4P31645 630 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 FLT3P36888 993 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 KIR2DL1P43626 348 aaPredicted RBP26.9■■□□□ 1.9
CPSF6-205ENST00000550075 DEUP1Q05D60 604 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 TRIM14Q14142 442 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 TDRD12Q587J7 1177 aaKnown RBP26.9■■□□□ 1.9
CPSF6-205ENST00000550075 EOGTQ5NDL2 527 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 BRMS1LQ5PSV4 323 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 MON1BQ7L1V2 547 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 CAMKK1Q8N5S9 505 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 ZNF513Q8N8E2 541 aaPredicted RBP26.9■■□□□ 1.9
CPSF6-205ENST00000550075 C3orf20Q8ND61 904 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 NELL1Q92832 810 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 NT5C3BQ969T7 300 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 SYT11Q9BT88 431 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 SELENOOQ9BVL4 669 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 SEMA4AQ9H3S1 761 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 HAUS4Q9H6D7 363 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 CAPN11Q9UMQ6 739 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 STARD13Q9Y3M8 1113 aa26.9■■□□□ 1.9
CPSF6-205ENST00000550075 GOLGA6L7A0A1B0GV03 622 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 ANKRD62A6NC57 917 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 F5H5T6 163 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 K7ESF4 209 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 TBL1XO60907 577 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 KLF8O95600 359 aaPredicted RBP26.89■■□□□ 1.9
CPSF6-205ENST00000550075 PTP4A2Q12974 167 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 MS4A13Q5J8X5 152 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 E4F1Q66K89 784 aaPredicted RBP26.89■■□□□ 1.9
CPSF6-205ENST00000550075 ACAD10Q6JQN1 1059 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 VPS36Q86VN1 386 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 SFTPA1Q8IWL2 248 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 ALLCQ8N6M5 410 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 UCMAQ8WVF2 138 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 TBCBQ99426 244 aa26.89■■□□□ 1.9
CPSF6-205ENST00000550075 BZW2Q9Y6E2 419 aaKnown RBP26.89■■□□□ 1.9
CPSF6-205ENST00000550075 TACR2P21452 398 aa26.88■■□□□ 1.89
CPSF6-205ENST00000550075 SDC4P31431 198 aa26.88■■□□□ 1.89
CPSF6-205ENST00000550075 EIF4HQ15056 248 aaKnown RBP26.88■■□□□ 1.89
CPSF6-205ENST00000550075 TTC39BQ5VTQ0 682 aaPredicted RBP26.88■■□□□ 1.89
CPSF6-205ENST00000550075 OTUD1Q5VV17 481 aaPredicted RBP26.88■■□□□ 1.89
CPSF6-205ENST00000550075 RAP1GAP2Q684P5 730 aa26.88■■□□□ 1.89
CPSF6-205ENST00000550075 DNAJC24Q6P3W2 148 aa26.88■■□□□ 1.89
CPSF6-205ENST00000550075 CCDC33Q8N5R6 958 aa26.88■■□□□ 1.89
CPSF6-205ENST00000550075 IL17RCQ8NAC3 791 aa26.88■■□□□ 1.89
CPSF6-205ENST00000550075 TXNDC5Q8NBS9 432 aaKnown RBP26.88■■□□□ 1.89
CPSF6-205ENST00000550075 ZBTB44Q8NCP5 570 aa26.88■■□□□ 1.89
CPSF6-205ENST00000550075 WFIKKN2Q8TEU8 576 aa26.88■■□□□ 1.89
CPSF6-205ENST00000550075 P2RY11Q96G91 374 aa26.88■■□□□ 1.89
CPSF6-205ENST00000550075 PRICKLE1Q96MT3 831 aaPredicted RBP26.88■■□□□ 1.89
CPSF6-205ENST00000550075 PIGVQ9NUD9 493 aa26.88■■□□□ 1.89
CPSF6-205ENST00000550075 C2orf42Q9NWW7 574 aa26.88■■□□□ 1.89
CPSF6-205ENST00000550075 R4GN57 208 aa26.88■■□□□ 1.89
CPSF6-205ENST00000550075 APBB3O95704 486 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 TPM1P09493 284 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 KRT3P12035 628 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 RDXP35241 583 aaKnown RBP26.87■■□□□ 1.89
CPSF6-205ENST00000550075 CXCR3P49682 368 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 RABGAP1LQ5R372 815 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 ACBD5Q5T8D3 534 aaPredicted RBP26.87■■□□□ 1.89
CPSF6-205ENST00000550075 RNF43Q68DV7 783 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 SPECC1LQ69YQ0 1117 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 SDE2Q6IQ49 451 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 ZNF571Q7Z3V5 609 aaPredicted RBP26.87■■□□□ 1.89
CPSF6-205ENST00000550075 MFN1Q8IWA4 741 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 LGI2Q8N0V4 545 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 TSTD1Q8NFU3 115 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 CPLX3Q8WVH0 158 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 VCPIP1Q96JH7 1222 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 WDCPQ9H6R7 721 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 STIM2Q9P246 746 aa26.87■■□□□ 1.89
CPSF6-205ENST00000550075 XPO7Q9UIA9 1087 aaKnown RBP26.87■■□□□ 1.89
CPSF6-205ENST00000550075 CCDC163A0A0D9SF12 145 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 PRRT4C9JH25 899 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 PROB1E7EW31 1015 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 NPC1O15118 1278 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 GYPCP04921 128 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 PDGFRAP16234 1089 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 DESP17661 470 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 SGSHP51688 502 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 DGKEP52429 567 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 LONP2Q86WA8 852 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 MCOLN2Q8IZK6 566 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 EMC1Q8N766 993 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 NKD2Q969F2 451 aaPredicted RBP26.86■■□□□ 1.89
CPSF6-205ENST00000550075 CFAP57Q96MR6 1250 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 HHIPQ96QV1 700 aa26.86■■□□□ 1.89
CPSF6-205ENST00000550075 MYO18AQ92614 2054 aaKnown RBP26.85■■□□□ 1.89
CPSF6-205ENST00000550075 ALDH1A2O94788 518 aa26.85■■□□□ 1.89
CPSF6-205ENST00000550075 SERPING1P05155 500 aa26.85■■□□□ 1.89
CPSF6-205ENST00000550075 GZMAP12544 262 aa26.85■■□□□ 1.89
CPSF6-205ENST00000550075 NTSR1P30989 418 aa26.85■■□□□ 1.89
CPSF6-205ENST00000550075 PTPN9P43378 593 aa26.85■■□□□ 1.89
CPSF6-205ENST00000550075 FNTBP49356 437 aa26.85■■□□□ 1.89
CPSF6-205ENST00000550075 RPS24P62847 133 aaKnown RBP26.85■■□□□ 1.89
CPSF6-205ENST00000550075 CDH18Q13634 790 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms