RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 HBS1LQ9Y450 684 aaKnown RBP12.54□□□□□ -0.4
CACNB3-213ENST00000550064 MFHAS1Q9Y4C4 1052 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 OBSL1O75147 1896 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 ATG2AQ2TAZ0 1938 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 DENND4CQ5VZ89 1909 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 ESYT3A0FGR9 886 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 C2orf78A6NCI8 922 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 PER2O15055 1255 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 DCLK1O15075 740 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 DAPK3O43293 454 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 LRIG2O94898 1065 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 APOEP02649 317 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 ITGAVP06756 1048 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 H2AFXP16104 143 aaPredicted RBP12.53□□□□□ -0.4
CACNB3-213ENST00000550064 MCM3P25205 808 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 GABRR2P28476 465 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 BMP8BP34820 402 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 KCNQ1P51787 676 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 KPNA1P52294 538 aaPredicted RBP12.53□□□□□ -0.4
CACNB3-213ENST00000550064 MLLT6P55198 1093 aaPredicted RBP12.53□□□□□ -0.4
CACNB3-213ENST00000550064 EIF3EP60228 445 aaKnown RBP12.53□□□□□ -0.4
CACNB3-213ENST00000550064 RING1Q06587 406 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 BRD3Q15059 726 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 PABPC1LQ4VXU2 614 aaKnown RBP12.53□□□□□ -0.4
CACNB3-213ENST00000550064 ARTNQ5T4W7 220 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 DUPD1Q68J44 220 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 FBXO38Q6PIJ6 1188 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 RTL10Q7L3V2 364 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 ADGRD2Q7Z7M1 963 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 C14orf80Q86SX3 495 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 ATP6V0D2Q8N8Y2 350 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 C1orf74Q96LT6 269 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 NACA2Q9H009 215 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 RNF38Q9H0F5 515 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 RAB17Q9H0T7 212 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 LMAN2LQ9H0V9 348 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 DPH5Q9H2P9 285 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 C10orf88Q9H8K7 445 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 MAN1C1Q9NR34 630 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 SLC12A6Q9UHW9 1150 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
CACNB3-213ENST00000550064 NEU2Q9Y3R4 380 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 HEY1Q9Y5J3 304 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 HS3ST4Q9Y661 456 aa12.53□□□□□ -0.4
CACNB3-213ENST00000550064 EPOPA6NHQ4 379 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 MCF2LO15068 1137 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 RFPL2O75678 378 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 GAS8O95995 478 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 OAS1P00973 400 aaKnown RBP12.52□□□□□ -0.41
CACNB3-213ENST00000550064 SRGAP2BP0DMP2 458 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 RBP3P10745 1247 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 MYL4P12829 197 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 ERCC2P18074 760 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 TNFRSF8P28908 595 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 NR2C2P49116 596 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 CARSP49589 748 aaKnown RBP12.52□□□□□ -0.41
CACNB3-213ENST00000550064 NRG1Q02297 640 aaPredicted RBP12.52□□□□□ -0.41
CACNB3-213ENST00000550064 LMNB2Q03252 620 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 GBE1Q04446 702 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 SLC10A2Q12908 348 aaPredicted RBP12.52□□□□□ -0.41
CACNB3-213ENST00000550064 PTK6Q13882 451 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 PAFAH1B3Q15102 231 aaKnown RBP12.52□□□□□ -0.41
CACNB3-213ENST00000550064 PPP1R7Q15435 360 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 TRIP13Q15645 432 aaPredicted RBP12.52□□□□□ -0.41
CACNB3-213ENST00000550064 PIK3R6Q5UE93 754 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 MANEALQ5VSG8 457 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 SYDE1Q6ZW31 735 aaPredicted RBP12.52□□□□□ -0.41
CACNB3-213ENST00000550064 GAREM2Q75VX8 874 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 B4GALNT4Q76KP1 1039 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 GSTA5Q7RTV2 222 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 RBM23Q86U06 439 aaKnown RBP12.52□□□□□ -0.41
CACNB3-213ENST00000550064 ZC3H18Q86VM9 953 aaKnown RBP12.52□□□□□ -0.41
CACNB3-213ENST00000550064 DDX42Q86XP3 938 aaKnown RBP eCLIP12.52□□□□□ -0.41
CACNB3-213ENST00000550064 ALLCQ8N6M5 410 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 GDPD5Q8WTR4 605 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 IFT81Q8WYA0 676 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 SEC14L1Q92503 715 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 CORO1BQ9BR76 489 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 KLF16Q9BXK1 252 aaPredicted RBP12.52□□□□□ -0.41
CACNB3-213ENST00000550064 TRIM31Q9BZY9 425 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 SLC28A3Q9HAS3 691 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 TRPC7Q9HCX4 862 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 GKN1Q9NS71 199 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 SNX24Q9Y343 169 aa12.52□□□□□ -0.41
CACNB3-213ENST00000550064 DOCK6Q96HP0 2047 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 H7C0C1 242 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 MAP3K6O95382 1288 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 KRT14P02533 472 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 MYBL2P10244 700 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 MBL2P11226 248 aaPredicted RBP12.51□□□□□ -0.41
CACNB3-213ENST00000550064 ETS1P14921 441 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 PTPN2P17706 415 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 EPHB2P29323 1055 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 HTR7P34969 479 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 ATP5OP48047 213 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 DRG2P55039 364 aaKnown RBP12.51□□□□□ -0.41
CACNB3-213ENST00000550064 COG7P83436 770 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 CYP4F8P98187 520 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 AUHQ13825 339 aaKnown RBP12.51□□□□□ -0.41
CACNB3-213ENST00000550064 MS4A13Q5J8X5 152 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms