RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 ZNF569Q5MCW4 686 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 WDR45BQ5MNZ6 344 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 GRHL2Q6ISB3 625 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 CFAP161Q6P656 301 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 VWA1Q6PCB0 445 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 MAVSQ7Z434 540 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 LNX2Q8N448 690 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNRPF-202ENST00000549580 SLC2A12Q8TD20 617 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 ST8SIA4Q92187 359 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 LPIN2Q92539 896 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 ZBTB10Q96DT7 871 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 DUSP26Q9BV47 211 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 PAIP1Q9H074 479 aaKnown RBP4.68□□□□□ -1.66
SNRPF-202ENST00000549580 TMX4Q9H1E5 349 aaPredicted RBP4.68□□□□□ -1.66
SNRPF-202ENST00000549580 CCDC134Q9H6E4 229 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 GLOD4Q9HC38 313 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 BLOC1S4Q9NUP1 217 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 GABRQQ9UN88 632 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 SH2B3Q9UQQ2 575 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 AFG3L2Q9Y4W6 797 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 PCDHB7Q9Y5E2 793 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 VWA3AA6NCI4 1184 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 MBD3L5A6NJ08 208 aaPredicted RBP4.67□□□□□ -1.66
SNRPF-202ENST00000549580 M0QYT0 321 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 SPRY2O43597 315 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 RNASEH2AO75792 299 aaKnown RBP4.67□□□□□ -1.66
SNRPF-202ENST00000549580 HEXIM1O94992 359 aaKnown RBP4.67□□□□□ -1.66
SNRPF-202ENST00000549580 DRD1P21728 446 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 YY1P25490 414 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 FAM3BP58499 235 aaPredicted RBP4.67□□□□□ -1.66
SNRPF-202ENST00000549580 RBM6P78332 1123 aaKnown RBP4.67□□□□□ -1.66
SNRPF-202ENST00000549580 NHLH1Q02575 133 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 P3H1Q32P28 736 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 ZNF484Q5JVG2 852 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 TEDDM1Q5T9Z0 273 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 SLC9C2Q5TAH2 1124 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 ANO7Q6IWH7 933 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 B3GALNT2Q8NCR0 500 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 NPIPB3Q92617 1050 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 CENPIQ92674 756 aaPredicted RBP4.67□□□□□ -1.66
SNRPF-202ENST00000549580 FKBP10Q96AY3 582 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 REXO5Q96IC2 774 aaKnown RBP4.67□□□□□ -1.66
SNRPF-202ENST00000549580 SEMA4GQ9NTN9 838 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 TBC1D22BQ9NU19 505 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 FBXO28Q9NVF7 368 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 TBX20Q9UMR3 447 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 UBE2J1Q9Y385 318 aaPredicted RBP4.67□□□□□ -1.66
SNRPF-202ENST00000549580 ADGRA2Q96PE1 1338 aa4.67□□□□□ -1.66
SNRPF-202ENST00000549580 A0A087X0M5 115 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 A0A1B0GX30 115 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 WDR27A2RRH5 827 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 PSMD9O00233 223 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 NKX2-8O15522 239 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 SEPT4O43236 478 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 PMPCBO75439 489 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 CYP3A4P08684 503 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 IL6RP08887 468 aaPredicted RBP4.66□□□□□ -1.66
SNRPF-202ENST00000549580 HNRNPA1P09651 372 aaKnown RBP eCLIP4.66□□□□□ -1.66
SNRPF-202ENST00000549580 MMP8P22894 467 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 GKP32189 559 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 MCM5P33992 734 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 THBS4P35443 961 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 LIPAP38571 399 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 RPL15P61313 204 aaKnown RBP4.66□□□□□ -1.66
SNRPF-202ENST00000549580 SRSF4Q08170 494 aaKnown RBP4.66□□□□□ -1.66
SNRPF-202ENST00000549580 ZNF169Q14929 603 aaPredicted RBP4.66□□□□□ -1.66
SNRPF-202ENST00000549580 SF3B3Q15393 1217 aaKnown RBP4.66□□□□□ -1.66
SNRPF-202ENST00000549580 TBCCQ15814 346 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 BAK1Q16611 211 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 GPATCH4Q5T3I0 446 aaKnown RBP4.66□□□□□ -1.66
SNRPF-202ENST00000549580 ZNF618Q5T7W0 954 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 ACAD10Q6JQN1 1059 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 GPR149Q86SP6 731 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 TCP11L2Q8N4U5 519 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 FAM71DQ8N9W8 422 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 MYCBPAPQ8TBZ2 947 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 ADAMTS18Q8TE60 1221 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 SSH3Q8TE77 659 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 R3HDM4Q96D70 268 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 Q96MF0 132 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 C7orf26Q96N11 449 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 EIF3CQ99613 913 aaKnown RBP4.66□□□□□ -1.66
SNRPF-202ENST00000549580 NPAS1Q99742 590 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 PLEKHA2Q9HB19 425 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 KLC4Q9NSK0 619 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 CYP46A1Q9Y6A2 500 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 MAST3O60307 1309 aa4.66□□□□□ -1.66
SNRPF-202ENST00000549580 CCDC187A0A096LP49 1063 aa4.65□□□□□ -1.67
SNRPF-202ENST00000549580 WDR91A4D1P6 747 aa4.65□□□□□ -1.67
SNRPF-202ENST00000549580 KLK10O43240 276 aa4.65□□□□□ -1.67
SNRPF-202ENST00000549580 HNRNPRO43390 633 aaKnown RBP4.65□□□□□ -1.67
SNRPF-202ENST00000549580 KCNAB3O43448 404 aa4.65□□□□□ -1.67
SNRPF-202ENST00000549580 TMEM63AO94886 807 aa4.65□□□□□ -1.67
SNRPF-202ENST00000549580 TJP3O95049 919 aa4.65□□□□□ -1.67
SNRPF-202ENST00000549580 HSP90AA1P07900 732 aaKnown RBP4.65□□□□□ -1.67
SNRPF-202ENST00000549580 RHOP08100 348 aa4.65□□□□□ -1.67
SNRPF-202ENST00000549580 ADRA1DP25100 572 aa4.65□□□□□ -1.67
SNRPF-202ENST00000549580 PSMC2P35998 433 aaKnown RBP4.65□□□□□ -1.67
SNRPF-202ENST00000549580 CASP6P55212 293 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms