RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 SPATA33Q96N06 139 aa14.56□□□□□ -0.08
RAPGEF3-218ENST00000548919 MRPL45Q9BRJ2 306 aaKnown RBP14.56□□□□□ -0.08
RAPGEF3-218ENST00000548919 FDXACB1Q9BRP7 624 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF3-218ENST00000548919 RNF19AQ9NV58 838 aa14.56□□□□□ -0.08
RAPGEF3-218ENST00000548919 TMEM216Q9P0N5 145 aa14.56□□□□□ -0.08
RAPGEF3-218ENST00000548919 HESX1Q9UBX0 185 aa14.56□□□□□ -0.08
RAPGEF3-218ENST00000548919 FKBP6O75344 327 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 ETS2P15036 469 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 GTF2A2P52657 109 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 EN1Q05925 392 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 INCA1Q0VD86 236 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 MSLNQ13421 630 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 STILQ15468 1287 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 MTHFD1LQ6UB35 978 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 DLK2Q6UY11 383 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 PDSS2Q86YH6 399 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 DEFB107AQ8IZN7 70 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 AGR3Q8TD06 166 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 KLRG1Q96E93 195 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 PDZD7Q9H5P4 517 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 DPP3Q9NY33 737 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 DTLQ9NZJ0 730 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 CPSF2Q9P2I0 782 aaKnown RBP14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 DNAJB4Q9UDY4 337 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 CDH22Q9UJ99 828 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 NME7Q9Y5B8 376 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 PTPRFP10586 1907 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 A6NJR5 290 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 DPYSL4O14531 572 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 MDM4O15151 490 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 GAS2O43903 313 aaKnown RBP14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 ERVK-10P10266 1014 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 GOT1P17174 413 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 ATICP31939 592 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 NIPAL4Q0D2K0 466 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 USP4Q13107 963 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 ITGA9Q13797 1035 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 CNPY1Q3B7I2 92 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 PDPK2PQ6A1A2 396 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 ISLR2Q6UXK2 745 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 FRMD7Q6ZUT3 714 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 CMC1Q7Z7K0 106 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 ZFAND2BQ8WV99 257 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 CSPG4P5Q96PW8 444 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 KCTD15Q96SI1 283 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 VPS33BQ9H267 617 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 ACSS2Q9NR19 701 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 MTMR10Q9NXD2 777 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 SCN1AP35498 2009 aa14.55□□□□□ -0.08
RAPGEF3-218ENST00000548919 PPEF2O14830 753 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 DCXO43602 365 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 GLRA3O75311 464 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 ITGA2BP08514 1039 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 SERPINB6P35237 376 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 MLH1P40692 756 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 DLG1Q12959 904 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 SEMA5AQ13591 1074 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 AMHR2Q16671 573 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 FBXO16Q8IX29 292 aaPredicted RBP14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 GDPD5Q8WTR4 605 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 TFB1MQ8WVM0 346 aaKnown RBP14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 MOCOSQ96EN8 888 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 QKIQ96PU8 341 aaKnown RBP eCLIP14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 TBCBQ99426 244 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 STK32BQ9NY57 414 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 AP4E1Q9UPM8 1137 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 ZNF195O14628 629 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 CCNT2O60583 730 aaKnown RBP14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 OPHN1O60890 802 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 STK10O94804 968 aaKnown RBP14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 KLHL2O95198 593 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 VTNP04004 478 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 SERPINE1P05121 402 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 TGFB3P10600 412 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 ARF4P18085 180 aaPredicted RBP14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 ABCG1P45844 678 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 CUL3Q13618 768 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 CELF3Q5SZQ8 465 aaKnown RBP14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 LBX2Q6XYB7 198 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 MARK2Q7KZI7 788 aaKnown RBP14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 C7orf31Q8N865 590 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 COLGALT1Q8NBJ5 622 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 PPP4R1Q8TF05 950 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 FAM192AQ9GZU8 254 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 VRTNQ9H8Y1 702 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 TMPRSS4Q9NRS4 437 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 SEPT10Q9P0V9 454 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 SORCS3Q9UPU3 1222 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 POMPQ9Y244 141 aa14.54□□□□□ -0.08
RAPGEF3-218ENST00000548919 MCM3APO60318 1980 aa14.53□□□□□ -0.08
RAPGEF3-218ENST00000548919 E9PBE3 544 aa14.53□□□□□ -0.08
RAPGEF3-218ENST00000548919 KLHL41O60662 606 aa14.53□□□□□ -0.08
RAPGEF3-218ENST00000548919 ALDH1A2O94788 518 aa14.53□□□□□ -0.08
RAPGEF3-218ENST00000548919 ITGAXP20702 1163 aa14.53□□□□□ -0.08
RAPGEF3-218ENST00000548919 PHKA2P46019 1235 aa14.53□□□□□ -0.08
RAPGEF3-218ENST00000548919 CDK7P50613 346 aa14.53□□□□□ -0.08
RAPGEF3-218ENST00000548919 NCBP2-AS2Q69YL0 99 aa14.53□□□□□ -0.08
RAPGEF3-218ENST00000548919 AAGABQ6PD74 315 aa14.53□□□□□ -0.08
RAPGEF3-218ENST00000548919 HTR3CQ8WXA8 447 aa14.53□□□□□ -0.08
RAPGEF3-218ENST00000548919 ARNTL2Q8WYA1 636 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms