RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 MAMLD1Q13495 774 aa20.83■□□□□ 0.92
CTDSP2-204ENST00000548823 CNGA2Q16280 664 aa20.83■□□□□ 0.92
CTDSP2-204ENST00000548823 SYT13Q7L8C5 426 aa20.83■□□□□ 0.92
CTDSP2-204ENST00000548823 PASD1Q8IV76 773 aa20.83■□□□□ 0.92
CTDSP2-204ENST00000548823 ALG3Q92685 438 aa20.83■□□□□ 0.92
CTDSP2-204ENST00000548823 ELOVL4Q9GZR5 314 aa20.83■□□□□ 0.92
CTDSP2-204ENST00000548823 GKN1Q9NS71 199 aa20.83■□□□□ 0.92
CTDSP2-204ENST00000548823 STIM2Q9P246 746 aa20.83■□□□□ 0.92
CTDSP2-204ENST00000548823 PIRO00625 290 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 FAM163BP0C2L3 166 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 DRD1P21728 446 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 GUCY2FP51841 1108 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 CDH8P55286 799 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 DUSP4Q13115 394 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 RUNX3Q13761 415 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 LONRF2Q1L5Z9 754 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 FBXO43Q4G163 708 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 ZNF394Q53GI3 561 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 C9orf57Q5W0N0 161 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 C19orf48Q6RUI8 117 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 CCNI2Q6ZMN8 369 aaPredicted RBP20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 MMS22LQ6ZRQ5 1243 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 CYP2U1Q7Z449 544 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 DNAJB7Q7Z6W7 309 aaPredicted RBP20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 UNC93AQ86WB7 457 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 WDTC1Q8N5D0 677 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 EIF1ADQ8N9N8 165 aaKnown RBP20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 CHFRQ96EP1 664 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 FAM83CQ9BQN1 747 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 OXCT2Q9BYC2 517 aaPredicted RBP20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 TASP1Q9H6P5 420 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 WDR35Q9P2L0 1181 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 PCDHB8Q9UN66 801 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 L1RE1Q9UN81 338 aa20.82■□□□□ 0.92
CTDSP2-204ENST00000548823 TMEM110-MUSTN1A8MSY1 372 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 H0Y626 953 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 TRIM16O95361 564 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 CD19P15391 556 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 GABRR2P28476 465 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 RWDD2BP57060 319 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 LMAN2Q12907 356 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 ERICH1Q86X53 443 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 C1orf131Q8NDD1 294 aaKnown RBP20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 PSMG2Q969U7 264 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 ZNF560Q96MR9 790 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 PGLYRP2Q96PD5 576 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 NT5C1AQ9BXI3 368 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 CRISPLD1Q9H336 500 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 HPS4Q9NQG7 708 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 GDAP2Q9NXN4 497 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 IP6K2Q9UHH9 426 aa20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 EVLQ9UI08 416 aaPredicted RBP20.81■□□□□ 0.92
CTDSP2-204ENST00000548823 IGSF10Q6WRI0 2623 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 KRIT1O00522 736 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 OAZ2O95190 189 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 ZIC2O95409 532 aaPredicted RBP20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 RDXP35241 583 aaKnown RBP20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 DGKEP52429 567 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 SIM1P81133 766 aaPredicted RBP20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 DMC1Q14565 340 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 USP39Q53GS9 565 aaKnown RBP20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 SGO2Q562F6 1265 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 SEL1L2Q5TEA6 688 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 LIMS2Q7Z4I7 341 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 C3orf20Q8ND61 904 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 RPLP0P6Q8NHW5 317 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 KRT35Q92764 455 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 DNAI2Q9GZS0 605 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 FBRSL1Q9HCM7 1045 aaKnown RBP20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 OGFRQ9NZT2 677 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 TUBGCP4Q9UGJ1 667 aa20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 CHORDC1Q9UHD1 332 aaPredicted RBP20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 DMGDHQ9UI17 866 aaKnown RBP20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.8■□□□□ 0.92
CTDSP2-204ENST00000548823 CACNA1EQ15878 2313 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 ASH1LQ9NR48 2969 aaKnown RBP20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 TMEM191CA6NGB0 347 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 OTOL1A6NHN0 477 aaPredicted RBP20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 BHMG1C9JSJ3 638 aaPredicted RBP20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 MAP2K7O14733 419 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 FGGP02679 453 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 LRPAP1P30533 357 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 GABRB2P47870 512 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 YWHAHQ04917 246 aaPredicted RBP20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 GPR17Q13304 367 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 PPP1R15BQ5SWA1 713 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 DENND1BQ6P3S1 775 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 LCLAT1Q6UWP7 414 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.79■□□□□ 0.921e-10■■■■■ 217.2
CTDSP2-204ENST00000548823 ACDQ96AP0 544 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 BTBD6Q96KE9 485 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 TWNKQ96RR1 684 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 KRT12Q99456 494 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 FUT8Q9BYC5 575 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 GDF3Q9NR23 364 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 INVSQ9Y283 1065 aa20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.79■□□□□ 0.92
CTDSP2-204ENST00000548823 GOLGA6L10A0A0M3HER8 536 aa20.78■□□□□ 0.92
CTDSP2-204ENST00000548823 SPAARA0A1B0GVQ0 90 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms