RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 SIX1Q15475 284 aaPredicted RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 SGO2Q562F6 1265 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 TRIM72Q6ZMU5 477 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 BEND5Q7L4P6 421 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 HOOK3Q86VS8 718 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 TMEM173Q86WV6 379 aaPredicted RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 CPNE8Q86YQ8 564 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 SLC13A5Q86YT5 568 aaPredicted RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 SLC44A2Q8IWA5 706 aaPredicted RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 B3GALNT2Q8NCR0 500 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 PRR7Q8TB68 274 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 RAPGEF5Q92565 580 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 MAML1Q92585 1016 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 PGM2Q96G03 612 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 HEXIM2Q96MH2 286 aaKnown RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 TWNKQ96RR1 684 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 NUP85Q9BW27 656 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 CNOT10Q9H9A5 744 aaKnown RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 CHST7Q9NS84 486 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 HMGXB4Q9UGU5 601 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 SSX2IPQ9Y2D8 614 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 PCDHGB3Q9Y5G1 929 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 TIMM13Q9Y5L4 95 aaPredicted RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 TCRBV7S2A1N4TA0A589 114 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 LINC01553A4QN01 128 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 THAP12O43422 761 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 FGF18O76093 207 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 CD19P15391 556 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 PTPN1P18031 435 aaKnown RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 TKTP29401 623 aaKnown RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 SSTR3P32745 418 aaPredicted RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 COILP38432 576 aaPredicted RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 SKIV2L2P42285 1042 aaKnown RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 PFKPQ01813 784 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 PPARDQ03181 441 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 UBE3AQ05086 875 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 SMARCB1Q12824 385 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 SLC29A2Q14542 456 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 RAB30Q15771 203 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 QPCTQ16769 361 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 VARS2Q5ST30 1063 aaKnown RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 ARHGAP17Q68EM7 881 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 LCLAT1Q6UWP7 414 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 KIAA0907Q7Z7F0 614 aaPredicted RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 ACOT1Q86TX2 421 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 OSTM1Q86WC4 334 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 CEP57Q86XR8 500 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 TDHQ8IZJ6 230 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 C12orf50Q8NA57 414 aaPredicted RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 TNIP2Q8NFZ5 429 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 BCL7CQ8WUZ0 217 aaPredicted RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 ZNF653Q96CK0 615 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 RUNDC3BQ96NL0 473 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 ZNF518BQ9C0D4 1074 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 LHX5Q9H2C1 402 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 TCF7L2Q9NQB0 619 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 KRT82Q9NSB4 513 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 UVRAGQ9P2Y5 699 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 M0QX08 132 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 O00370 1275 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 SPOPO43791 374 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 CLASP2O75122 1294 aaKnown RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 LSM8O95777 96 aaKnown RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 RARAP10276 462 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 GRK2P25098 689 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 KRT20P35900 424 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 ATP6V1E1P36543 226 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 DSG1Q02413 1049 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 DBN1Q16643 649 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 INTS6LQ5JSJ4 861 aaKnown RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 ERMARDQ5T6L9 678 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 DENND2CQ68D51 928 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 ACAD10Q6JQN1 1059 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 KIAA1841Q6NSI8 718 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 MZT2AQ6P582 158 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 FAM171BQ6P995 826 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 DCP1BQ8IZD4 617 aaKnown RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 SLC7A5P1Q8MH63 180 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 ANKK1Q8NFD2 765 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 TFAP2BQ92481 460 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 ART4Q93070 314 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 THAP11Q96EK4 314 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 BTBD6Q96KE9 485 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 HNRNPABQ99729 332 aaKnown RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 RTP3Q9BQQ7 232 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 SYT15Q9BQS2 421 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 TMEM109Q9BVC6 243 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 HERC2P3Q9BVR0 1158 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 SEMA4AQ9H3S1 761 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 LRRC19Q9H756 370 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 METTL5Q9NRN9 209 aaKnown RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 MTRF1LQ9UGC7 380 aaKnown RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 MTUS1Q9ULD2 1270 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 COLQQ9Y215 455 aaPredicted RBP6.8□□□□□ -1.32
CASC18-202ENST00000548557 NME7Q9Y5B8 376 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 BACE2Q9Y5Z0 518 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 CAPN7Q9Y6W3 813 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 PTPRSQ13332 1948 aa6.8□□□□□ -1.32
CASC18-202ENST00000548557 LCHNA4D1U4 455 aa6.79□□□□□ -1.32
CASC18-202ENST00000548557 FSCN2O14926 492 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms