RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SLC2A11Q9BYW1 496 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 BTBD1Q9H0C5 482 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 LRRC4Q9HBW1 653 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 TMEM8AQ9HCN3 771 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 TM9SF3Q9HD45 589 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 KIAA1522Q9P206 1035 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 STIM2Q9P246 746 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 ZDHHC9Q9Y397 364 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 NFE2L3Q9Y4A8 694 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 H0Y8X5 98 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 MAPK13O15264 365 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 FLRT2O43155 660 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 SEMA4FO95754 770 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 DNTTP04053 509 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 LCP1P13796 627 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 CD19P15391 556 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 RPL13P26373 211 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 SYKP43405 635 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 AFF3P51826 1226 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 CLDN6P56747 220 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 SLC8A3P57103 927 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 RPS14P62263 151 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 ADIGQ0VDE8 80 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 CAMK2GQ13555 558 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 EIF4HQ15056 248 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 TEAD4Q15561 434 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 TRIP4Q15650 581 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 TCERG1LQ5VWI1 586 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 BSPRYQ5W0U4 402 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 MBLAC2Q68D91 279 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 DHRS13Q6UX07 377 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 ZC3H3Q8IXZ2 948 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 SMYD4Q8IYR2 804 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 BAHD1Q8TBE0 780 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 WFDC5Q8TCV5 224 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 TMEM174Q8WUU8 243 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 CRELD1Q96HD1 420 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 SPATA32Q96LK8 384 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 IPO9Q96P70 1041 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 DCBLD2Q96PD2 775 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 CDC6Q99741 560 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 UBXN6Q9BZV1 441 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 PRSS16Q9NQE7 514 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 RAB20Q9NX57 234 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 GGA2Q9UJY4 613 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 TSPAN16Q9UKR8 245 aa12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 MUC22E2RYF6 1773 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-205ENST00000548277 NYNRINQ9P2P1 1898 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 YJEFN3A6XGL0 299 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 E7ENQ6 273 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 CBX4O00257 560 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 TBL1XO60907 577 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 RHOBTB3O94955 611 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 ZIC2O95409 532 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 IGLV3-19P01714 112 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 ZNF883P0CG24 379 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 PABPC1P11940 636 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 POLR2EP19388 210 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 CMA1P23946 247 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 CD70P32970 193 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 NUMBP49757 651 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 RGS7P49802 495 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 NDUFA8P51970 172 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 KRT85P78386 507 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 E2F5Q15329 346 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 PTPRNQ16849 979 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 ARHGAP17Q68EM7 881 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 PM20D1Q6GTS8 502 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 DBX2Q6ZNG2 339 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 BHLHA9Q7RTU4 235 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 ADIPOR2Q86V24 386 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 GATAD2AQ86YP4 633 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 FAM217AQ8IXS0 508 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 FBXL13Q8NEE6 735 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 BBC3Q96PG8 261 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 TMEM245Q9H330 911 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 OLA1Q9NTK5 396 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 HESX1Q9UBX0 185 aa12.46□□□□□ -0.41
TRAFD1-205ENST00000548277 FASNP49327 2511 aaKnown RBP12.46□□□□□ -0.42
TRAFD1-205ENST00000548277 APC2O95996 2303 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 EIF4E1BA6NMX2 242 aaKnown RBP12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 XPO1O14980 1071 aaKnown RBP12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 MXI1P50539 228 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 DPYDQ12882 1025 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 SGO2Q562F6 1265 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 DCAF17Q5H9S7 520 aaPredicted RBP12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 ADGRF1Q5T601 910 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 AHI1Q8N157 1196 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 SIX6OS1Q8N1H7 587 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 WFIKKN2Q8TEU8 576 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 SUN2Q9UH99 717 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 USP25Q9UHP3 1055 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 HPSEQ9Y251 543 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 NCKAP1Q9Y2A7 1128 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 HBS1LQ9Y450 684 aaKnown RBP12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 PCDHGB2Q9Y5G2 931 aa12.45□□□□□ -0.42
TRAFD1-205ENST00000548277 PLK4O00444 970 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 TNFSF14O43557 240 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 CALCAP01258 141 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms