RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 FAM237AA0A1B0GTK4 181 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 POLR2DO15514 142 aaKnown RBP9.69□□□□□ -0.86
SSH1-205ENST00000546812 CYP26A1O43174 497 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 DXOO77932 396 aaKnown RBP9.69□□□□□ -0.86
SSH1-205ENST00000546812 MT-CO3P00414 261 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 WNT1P04628 370 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 NTRK1P04629 796 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 CYBBP04839 570 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 DLATP10515 647 aaKnown RBP9.69□□□□□ -0.86
SSH1-205ENST00000546812 RARGP13631 454 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 COL5A1P20908 1838 aaPredicted RBP9.69□□□□□ -0.86
SSH1-205ENST00000546812 EPHA8P29322 1005 aaPredicted RBP9.69□□□□□ -0.86
SSH1-205ENST00000546812 E2F1Q01094 437 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 VAC14Q08AM6 782 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 TTC31Q49AM3 519 aaPredicted RBP9.69□□□□□ -0.86
SSH1-205ENST00000546812 C10orf120Q5SQS8 335 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 SFMBT2Q5VUG0 894 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 TADA2BQ86TJ2 420 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 LSMEM2Q8N112 164 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 GOLGA1Q92805 767 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 FGFBP2Q9BYJ0 223 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 DPH1Q9BZG8 443 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 DCLK3Q9C098 648 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 XYLT2Q9H1B5 865 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 PRSS16Q9NQE7 514 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 GDF3Q9NR23 364 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.69□□□□□ -0.86
SSH1-205ENST00000546812 NUDT5Q9UKK9 219 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 PLA2G4CQ9UP65 541 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 HPSEQ9Y251 543 aa9.69□□□□□ -0.86
SSH1-205ENST00000546812 A0A1W2PQH9 124 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 A0A1W2PR77 199 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 KLK10O43240 276 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 ACTN4O43707 911 aaKnown RBP9.68□□□□□ -0.86
SSH1-205ENST00000546812 TNNI1P19237 187 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 ACP1P24666 158 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 CD38P28907 300 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 ATICP31939 592 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 SYKP43405 635 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 RXRGP48443 463 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 MAP3K7CLP57077 242 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 ERVPABLB-1P60509 514 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 MYL6P60660 151 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 COG7P83436 770 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 BNIP3Q12983 259 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 TRPC3Q13507 836 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 FNDC3BQ53EP0 1204 aaKnown RBP9.68□□□□□ -0.86
SSH1-205ENST00000546812 COLEC12Q5KU26 742 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 KDM7AQ6ZMT4 941 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 CLEC17AQ6ZS10 378 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 USP30Q70CQ3 517 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 SV2BQ7L1I2 683 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 GPRIN1Q7Z2K8 1008 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 PRICKLE2Q7Z3G6 844 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 ACOT1Q86TX2 421 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 GRAMD1CQ8IYS0 662 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 ZNF276Q8N554 614 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 IQUBQ8NA54 791 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 SLC2A14Q8TDB8 520 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 KCNE4Q8WWG9 221 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 SYAP1Q96A49 352 aaPredicted RBP9.68□□□□□ -0.86
SSH1-205ENST00000546812 SMYD3Q9H7B4 428 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 ERVMER34-1Q9H9K5 563 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 EBF2Q9HAK2 575 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 HSPBP1Q9NZL4 362 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 SERTAD1Q9UHV2 236 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 AGO1Q9UL18 857 aaKnown RBP9.68□□□□□ -0.86
SSH1-205ENST00000546812 NCKAP1Q9Y2A7 1128 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 SSUH2Q9Y2M2 353 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 PCDHB1Q9Y5F3 818 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 NOTCH2Q04721 2471 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 FLNCQ14315 2725 aa9.68□□□□□ -0.86
SSH1-205ENST00000546812 FRMD3A2A2Y4 597 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 FAM47DPA6NHR8 397 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 MPOP05164 745 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 KRT10P13645 584 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 CCDC130P13994 396 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 IDEP14735 1019 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 CORO1AP31146 461 aaKnown RBP9.67□□□□□ -0.86
SSH1-205ENST00000546812 LSSP48449 732 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 GALCP54803 685 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 NXPH1P58417 271 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 UBE2HP62256 183 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 PDE4CQ08493 712 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 SNRNP35Q16560 246 aaKnown RBP9.67□□□□□ -0.86
SSH1-205ENST00000546812 PROX2Q3B8N5 592 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 KANSL1Q7Z3B3 1105 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 CEP57L1Q8IYX8 460 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 CPXM2Q8N436 756 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 OXR1Q8N573 874 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 ZNF366Q8N895 744 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 DDI1Q8WTU0 396 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 CYB5D2Q8WUJ1 264 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 ZNF516Q92618 1163 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 CCDC127Q96BQ5 260 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 CGRRF1Q99675 332 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 CUEDC2Q9H467 287 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 VRTNQ9H8Y1 702 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 AASDHPPTQ9NRN7 309 aa9.67□□□□□ -0.86
SSH1-205ENST00000546812 NAGPAQ9UK23 515 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms