RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 CHSY1Q86X52 802 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 LRRC57Q8N9N7 239 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 TRIM58Q8NG06 486 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 KIAA1524Q8TCG1 905 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 ATP2A3Q93084 1043 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 LRRC3BQ96PB8 259 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 PEBP4Q96S96 227 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 TRMT61BQ9BVS5 477 aaKnown RBP11.15□□□□□ -0.62
PAAF1-216ENST00000546039 PLA2G2FQ9BZM2 168 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 KCNK12Q9HB15 430 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 TRMT1Q9NXH9 659 aaKnown RBP11.15□□□□□ -0.62
PAAF1-216ENST00000546039 PCSK1NQ9UHG2 260 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 FZD10Q9ULW2 581 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 AP4E1Q9UPM8 1137 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 ALG6Q9Y672 507 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 WNT6Q9Y6F9 365 aa11.15□□□□□ -0.62
PAAF1-216ENST00000546039 NCOR1O75376 2440 aa11.15□□□□□ -0.63
PAAF1-216ENST00000546039 NYNRINQ9P2P1 1898 aaKnown RBP11.15□□□□□ -0.63
PAAF1-216ENST00000546039 TYW5A2RUC4 315 aaKnown RBP11.14□□□□□ -0.63
PAAF1-216ENST00000546039 F5H5T6 163 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 SCAMP3O14828 347 aaKnown RBP11.14□□□□□ -0.63
PAAF1-216ENST00000546039 PALMO75781 387 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 TACR2P21452 398 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 MSNP26038 577 aaKnown RBP11.14□□□□□ -0.63
PAAF1-216ENST00000546039 IL1R2P27930 398 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 GDI1P31150 447 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 HTR7P34969 479 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 GJC1P36383 396 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 ZNF135P52742 658 aaPredicted RBP11.14□□□□□ -0.63
PAAF1-216ENST00000546039 TAS2R40P59535 323 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 GRM2Q14416 872 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 EML3Q32P44 896 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 FAM133BQ5BKY9 247 aaKnown RBP11.14□□□□□ -0.63
PAAF1-216ENST00000546039 MS4A13Q5J8X5 152 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 NADSYN1Q6IA69 706 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 LRRC31Q6UY01 552 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 PEX26Q7Z412 305 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 CPNE8Q86YQ8 564 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 RHOT1Q8IXI2 618 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 CPA6Q8N4T0 437 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 ST13P5Q8NFI4 369 aaPredicted RBP11.14□□□□□ -0.63
PAAF1-216ENST00000546039 RSAD2Q8WXG1 361 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 DNASE1L2Q92874 299 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 ASIC4Q96FT7 647 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 C1orf74Q96LT6 269 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 EPAS1Q99814 870 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 PRMT1Q99873 361 aaKnown RBP11.14□□□□□ -0.63
PAAF1-216ENST00000546039 FAM83CQ9BQN1 747 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 RPP25Q9BUL9 199 aaKnown RBP11.14□□□□□ -0.63
PAAF1-216ENST00000546039 SIK2Q9H0K1 926 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 OSBPL2Q9H1P3 480 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 GOLPH3Q9H4A6 298 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 BRD9Q9H8M2 597 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 ZWILCHQ9H900 591 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 ANLNQ9NQW6 1124 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 XPO7Q9UIA9 1087 aaKnown RBP11.14□□□□□ -0.63
PAAF1-216ENST00000546039 AMFRQ9UKV5 643 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 ZKSCAN5Q9Y2L8 839 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 HS3ST4Q9Y661 456 aa11.14□□□□□ -0.63
PAAF1-216ENST00000546039 MYO18AQ92614 2054 aaKnown RBP11.13□□□□□ -0.63
PAAF1-216ENST00000546039 CCDC66A2RUB6 948 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 USP27XA6NNY8 438 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 MIF4GDA9UHW6 222 aaKnown RBP11.13□□□□□ -0.63
PAAF1-216ENST00000546039 I6L893 689 aaPredicted RBP11.13□□□□□ -0.63
PAAF1-216ENST00000546039 GFRA2O00451 464 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 KIF5CO60282 957 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 ADH1CP00326 375 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 CYBBP04839 570 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 ASGR2P07307 311 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 RARAP10276 462 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 TCF4P15884 667 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 CTNNA2P26232 953 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 SLC6A4P31645 630 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 L1CAMP32004 1257 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 MLLT6P55198 1093 aaPredicted RBP11.13□□□□□ -0.63
PAAF1-216ENST00000546039 NR1H3Q13133 447 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 TDGQ13569 410 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 DPYSL2Q16555 572 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 SMTNL2Q2TAL5 461 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 TJAP1Q5JTD0 557 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 RABGAP1LQ5R372 815 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 MANEALQ5VSG8 457 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 TTC39BQ5VTQ0 682 aaPredicted RBP11.13□□□□□ -0.63
PAAF1-216ENST00000546039 RAP1GAP2Q684P5 730 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 NT5DC3Q86UY8 548 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.13□□□□□ -0.63
PAAF1-216ENST00000546039 LGI2Q8N0V4 545 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 SLC44A3Q8N4M1 653 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 HJURPQ8NCD3 748 aaPredicted RBP11.13□□□□□ -0.63
PAAF1-216ENST00000546039 HSPH1Q92598 858 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 IRF7Q92985 503 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 CD101Q93033 1021 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 ZFYVE19Q96K21 471 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 DHX35Q9H5Z1 703 aaKnown RBP11.13□□□□□ -0.63
PAAF1-216ENST00000546039 TRPV5Q9NQA5 729 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 SPHK2Q9NRA0 654 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 TMPRSS4Q9NRS4 437 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.13□□□□□ -0.63
PAAF1-216ENST00000546039 GPATCH2LQ9NWQ4 482 aa11.13□□□□□ -0.63
PAAF1-216ENST00000546039 DDX56Q9NY93 547 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms