RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 MIB1Q86YT6 1006 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 BBS7Q8IWZ6 715 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 ATRIPQ8WXE1 791 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 IRGQQ8WZA9 623 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 SHC3Q92529 594 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 CHFRQ96EP1 664 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 PNKPQ96T60 521 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 ZSWIM1Q9BR11 485 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 ZCCHC2Q9C0B9 1178 aaKnown RBP7.71□□□□□ -1.18
CPSF7-224ENST00000544990 VPS16Q9H269 839 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 SPHK2Q9NRA0 654 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 ST7Q9NRC1 585 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 RBM12Q9NTZ6 932 aaKnown RBP7.71□□□□□ -1.18
CPSF7-224ENST00000544990 FANCLQ9NW38 375 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 TAB2Q9NYJ8 693 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 MARCH2Q9P0N8 246 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 TMEM63CQ9P1W3 806 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 FANCMQ8IYD8 2048 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 SLC12A8A0AV02 714 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 YJEFN3A6XGL0 299 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 BECN2A8MW95 431 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 E7ENQ6 273 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 FOXN3O00409 490 aaPredicted RBP7.7□□□□□ -1.18
CPSF7-224ENST00000544990 SCAMP3O14828 347 aaKnown RBP7.7□□□□□ -1.18
CPSF7-224ENST00000544990 KHNYNO15037 678 aaKnown RBP7.7□□□□□ -1.18
CPSF7-224ENST00000544990 MDM4O15151 490 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 STC2O76061 302 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 EGFP01133 1207 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 CALCAP01258 141 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 LTFP02788 710 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 APODP05090 189 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 KRT9P35527 623 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 CHKAP35790 457 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 OPRD1P41143 372 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 GPD2P43304 727 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 MRE11P49959 708 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 DAOAP59103 153 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 APBA1Q02410 837 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 KCNMA1Q12791 1236 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 RAPGEF1Q13905 1077 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 GAS6Q14393 721 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 KRT31Q15323 416 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 ANO4Q32M45 955 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 LY6G5CQ5SRR4 150 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 KLHDC7AQ5VTJ3 777 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 CDKAL1Q5VV42 579 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 CAVIN1Q6NZI2 390 aaKnown RBP7.7□□□□□ -1.18
CPSF7-224ENST00000544990 MAML2Q8IZL2 1156 aaPredicted RBP7.7□□□□□ -1.18
CPSF7-224ENST00000544990 NDRG1Q92597 394 aaKnown RBP7.7□□□□□ -1.18
CPSF7-224ENST00000544990 NKD2Q969F2 451 aaPredicted RBP7.7□□□□□ -1.18
CPSF7-224ENST00000544990 PLD4Q96BZ4 506 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 MRRFQ96E11 262 aaKnown RBP7.7□□□□□ -1.18
CPSF7-224ENST00000544990 NOX5Q96PH1 765 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 XPO6Q96QU8 1125 aaKnown RBP7.7□□□□□ -1.18
CPSF7-224ENST00000544990 TRIM62Q9BVG3 475 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 LSM14BQ9BX40 385 aaKnown RBP7.7□□□□□ -1.18
CPSF7-224ENST00000544990 PDCL3Q9H2J4 239 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 FBRSL1Q9HCM7 1045 aaKnown RBP7.7□□□□□ -1.18
CPSF7-224ENST00000544990 SIX2Q9NPC8 291 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 PLCB1Q9NQ66 1216 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 PRMT8Q9NR22 394 aaPredicted RBP7.7□□□□□ -1.18
CPSF7-224ENST00000544990 ZSCAN32Q9NX65 697 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 WDR35Q9P2L0 1181 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 SLC8A2Q9UPR5 921 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 DAAM1Q9Y4D1 1078 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 CEP83Q9Y592 693 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 PCDHGA2Q9Y5H1 932 aa7.7□□□□□ -1.18
CPSF7-224ENST00000544990 CHURC1-FNTBB4DL54 471 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 PIK3R2O00459 728 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 CAPN9O14815 690 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 HOXC11O43248 304 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-224ENST00000544990 GREM1O60565 184 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 PAPSS2O95340 614 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-224ENST00000544990 CYBBP04839 570 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 HMBSP08397 361 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 UCHL3P15374 230 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 CORO1AP31146 461 aaKnown RBP7.69□□□□□ -1.18
CPSF7-224ENST00000544990 GRIA2P42262 883 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 SLC6A11P48066 632 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 RPL34P49207 117 aaKnown RBP7.69□□□□□ -1.18
CPSF7-224ENST00000544990 HARS2P49590 506 aaKnown RBP7.69□□□□□ -1.18
CPSF7-224ENST00000544990 COPB1P53618 953 aaKnown RBP7.69□□□□□ -1.18
CPSF7-224ENST00000544990 SATB1Q01826 763 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 DRAP1Q14919 205 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-224ENST00000544990 KLHL40Q2TBA0 621 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 ANO6Q4KMQ2 910 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 TTC39BQ5VTQ0 682 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-224ENST00000544990 DENND1BQ6P3S1 775 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 TSSK4Q6SA08 328 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 XKR5Q6UX68 686 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 Q6ZNB5 142 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 Q6ZS52 159 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 TPGS1Q6ZTW0 290 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 BHLHA9Q7RTU4 235 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 TMEM110Q86TL2 294 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 TMEM25Q86YD3 366 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 FMNL3Q8IVF7 1028 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 FAM71AQ8IYT1 594 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 NAT16Q8N8M0 369 aa7.69□□□□□ -1.18
CPSF7-224ENST00000544990 RPLP0P6Q8NHW5 317 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms