RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 O00370 1275 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 BIN1O00499 593 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 TRIM24O15164 1050 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 KLKB1P03952 638 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 BMP6P22004 513 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 CORO1AP31146 461 aaKnown RBP16.94■□□□□ 0.3
DDX55-212ENST00000544738 PAK1Q13153 545 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 STILQ15468 1287 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 CCDC157Q569K6 752 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 LCLAT1Q6UWP7 414 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 SIX6OS1Q8N1H7 587 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 SCML4Q8N228 414 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 PPM1KQ8N3J5 372 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 RHBDD1Q8TEB9 315 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 KCTD13Q8WZ19 329 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 FOXJ1Q92949 421 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 ULBP1Q9BZM6 244 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 GAREM1Q9H706 876 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 FBXO10Q9UK96 956 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 CTNND2Q9UQB3 1225 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 RAI2Q9Y5P3 530 aa16.94■□□□□ 0.3
DDX55-212ENST00000544738 KNL1Q8NG31 2342 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 PTPRBP23467 1997 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 KNTC1P50748 2209 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 A0A1W2PQF6 199 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 SLC12A8A0AV02 714 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 ATXN7O15265 892 aaPredicted RBP16.93■□□□□ 0.3
DDX55-212ENST00000544738 GADD45BO75293 160 aaPredicted RBP16.93■□□□□ 0.3
DDX55-212ENST00000544738 FGFR1OPO95684 399 aaKnown RBP16.93■□□□□ 0.3
DDX55-212ENST00000544738 PENKP01210 267 aaPredicted RBP16.93■□□□□ 0.3
DDX55-212ENST00000544738 CYBBP04839 570 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 HMBSP08397 361 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 CISD3P0C7P0 127 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 NDUFV2P19404 249 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 ITPKBP27987 946 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 MARSP56192 900 aaKnown RBP16.93■□□□□ 0.3
DDX55-212ENST00000544738 GCNT1Q02742 428 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 E2F5Q15329 346 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 CNGA2Q16280 664 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 TRIM59Q8IWR1 403 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 CHPFQ8IZ52 775 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 GALNT15Q8N3T1 639 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 LMO3Q8TAP4 145 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 UBA3Q8TBC4 463 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 RNF139Q8WU17 664 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 PLD4Q96BZ4 506 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 MIR1-1HGQ9H1L0 117 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 SLC6A17Q9H1V8 727 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 CD93Q9NPY3 652 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 CNGB3Q9NQW8 809 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 TM7SF3Q9NS93 570 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 ABCC13Q9NSE7 274 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 TOR4AQ9NXH8 423 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 AGO1Q9UL18 857 aaKnown RBP16.93■□□□□ 0.3
DDX55-212ENST00000544738 SLC27A6Q9Y2P4 619 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 PCDHB4Q9Y5E5 795 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 PLXND1Q9Y4D7 1925 aa16.93■□□□□ 0.3
DDX55-212ENST00000544738 A0A1B0GTW7 788 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 TULP2O00295 520 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 GFRA2O00451 464 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 ADIGQ0VDE8 80 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 KCNH2Q12809 1159 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 CAMK2BQ13554 666 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 PKDCCQ504Y2 493 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 EGFLAMQ63HQ2 1017 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 DENND1CQ8IV53 801 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 CPXM2Q8N436 756 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 PDCD7Q8N8D1 485 aaKnown RBP16.92■□□□□ 0.3
DDX55-212ENST00000544738 EHBP1Q8NDI1 1231 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 IPO4Q8TEX9 1081 aaKnown RBP16.92■□□□□ 0.3
DDX55-212ENST00000544738 BHMTQ93088 406 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 ACOX2Q99424 681 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 CDC6Q99741 560 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 SRRTQ9BXP5 876 aaKnown RBP16.92■□□□□ 0.3
DDX55-212ENST00000544738 PLK2Q9NYY3 685 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 HCN2Q9UL51 889 aa16.92■□□□□ 0.3
DDX55-212ENST00000544738 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.92■□□□□ 0.3
DDX55-212ENST00000544738 MEI4A8MW99 385 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 PRRT4C9JH25 899 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 NPC1O15118 1278 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 AFPP02771 609 aaKnown RBP16.91■□□□□ 0.3
DDX55-212ENST00000544738 HARS2P49590 506 aaKnown RBP16.91■□□□□ 0.3
DDX55-212ENST00000544738 STX17P56962 302 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 TRIP4Q15650 581 aaPredicted RBP16.91■□□□□ 0.3
DDX55-212ENST00000544738 FYB2Q5VWT5 728 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 BSPRYQ5W0U4 402 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 KIAA1324Q6UXG2 1013 aaKnown RBP16.91■□□□□ 0.3
DDX55-212ENST00000544738 BHLHA9Q7RTU4 235 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 ZNF843Q8N446 348 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 ZCCHC9Q8N567 271 aaKnown RBP16.91■□□□□ 0.3
DDX55-212ENST00000544738 SLC35F5Q8WV83 523 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 UCMAQ8WVF2 138 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 TFAP2BQ92481 460 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 GABRG3Q99928 467 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 SLC2A11Q9BYW1 496 aa16.91■□□□□ 0.3
DDX55-212ENST00000544738 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDX55-212ENST00000544738 FNDC3AQ9Y2H6 1198 aaKnown RBP16.91■□□□□ 0.3
DDX55-212ENST00000544738 HBS1LQ9Y450 684 aaKnown RBP16.91■□□□□ 0.3
DDX55-212ENST00000544738 MYO18BQ8IUG5 2567 aa16.9■□□□□ 0.3
DDX55-212ENST00000544738 CER1O95813 267 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms