RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 APOEP02649 317 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 SERPINE1P05121 402 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 KDELR1P24390 212 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 NPTX2P47972 431 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 ARPC4P59998 168 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 PSMC1P62191 440 aaKnown RBP13.02□□□□□ -0.33
SMG8-202ENST00000543872 BNIP3Q12983 259 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 CEACAM7Q14002 265 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 PIGHQ14442 188 aaPredicted RBP13.02□□□□□ -0.33
SMG8-202ENST00000543872 MGAT5BQ3V5L5 792 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 PPM1JQ5JR12 505 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 LRRC38Q5VT99 294 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 GPR107Q5VW38 600 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 UNC5AQ6ZN44 842 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 KRT27Q7Z3Y8 459 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.33
SMG8-202ENST00000543872 TMCO5AQ8N6Q1 288 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 UBR7Q8N806 425 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 MARK4Q96L34 752 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 OR52B2Q96RD2 323 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 RTKNQ9BST9 563 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 TPK1Q9H3S4 243 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 ZNF358Q9NW07 568 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 ADA2Q9NZK5 511 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 SNX13Q9Y5W8 968 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 ZC3H11AO75152 810 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMG8-202ENST00000543872 HSPA4LO95757 839 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 TSHRP16473 764 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 ALDH3B2P48448 385 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 CDK18Q07002 472 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 ITGADQ13349 1161 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 ART3Q13508 389 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 CAMK2BQ13554 666 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 ZNF423Q2M1K9 1284 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 NANOGP8Q6NSW7 305 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 GPD1LQ8N335 351 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 FAM47BQ8NA70 645 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 MFSD14AQ96MC6 490 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 KLHL32Q96NJ5 620 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 PIH1D1Q9NWS0 290 aaKnown RBP13.01□□□□□ -0.33
SMG8-202ENST00000543872 IGSF9Q9P2J2 1179 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 TCEAL9Q9UHQ7 104 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 ZNHIT2Q9UHR6 403 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 PRR12Q9ULL5 1215 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 RABL2BQ9UNT1 228 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 CSDE1O75534 798 aaKnown RBP13.01□□□□□ -0.33
SMG8-202ENST00000543872 ATE1O95260 518 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 ZBED1O96006 694 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 RALBP11234 206 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 YWHABP31946 246 aaKnown RBP13.01□□□□□ -0.33
SMG8-202ENST00000543872 WNT7BP56706 349 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 SLC9A4Q6AI14 798 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 SCARA3Q6AZY7 606 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 SLC39A4Q6P5W5 647 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 TNS4Q8IZW8 715 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 MPP5Q8N3R9 675 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 JOSD2Q8TAC2 188 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 LRTOMTQ8WZ04 291 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 BORCS5Q969J3 196 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 PPWD1Q96BP3 646 aaKnown RBP13.01□□□□□ -0.33
SMG8-202ENST00000543872 CIB1Q99828 191 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 TJP2Q9UDY2 1190 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 TESPA1A2RU30 521 aaPredicted RBP13.01□□□□□ -0.33
SMG8-202ENST00000543872 H3BNH8 94 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 ACO1P21399 889 aaKnown RBP13.01□□□□□ -0.33
SMG8-202ENST00000543872 PIK3R1P27986 724 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 SLC10A2Q12908 348 aaPredicted RBP13.01□□□□□ -0.33
SMG8-202ENST00000543872 PRKG1Q13976 671 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 HADHQ16836 314 aaKnown RBP13.01□□□□□ -0.33
SMG8-202ENST00000543872 TDRD10Q5VZ19 366 aaKnown RBP13.01□□□□□ -0.33
SMG8-202ENST00000543872 BSPRYQ5W0U4 402 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 ZFP1Q6P2D0 407 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 TICAM1Q8IUC6 712 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 CHERPQ8IWX8 916 aaKnown RBP13.01□□□□□ -0.33
SMG8-202ENST00000543872 LINC00116Q8NCU8 138 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 TMEM161BQ8NDZ6 487 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 MAPK15Q8TD08 544 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 SORT1Q99523 831 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 POPDC2Q9HBU9 364 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 C20orf96Q9NUD7 363 aaPredicted RBP13.01□□□□□ -0.33
SMG8-202ENST00000543872 ATAD3AQ9NVI7 634 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 GGA1Q9UJY5 639 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 GAKO14976 1311 aa13.01□□□□□ -0.33
SMG8-202ENST00000543872 MCF2P10911 925 aa13□□□□□ -0.33
SMG8-202ENST00000543872 CCDC130P13994 396 aa13□□□□□ -0.33
SMG8-202ENST00000543872 CPA3P15088 417 aa13□□□□□ -0.33
SMG8-202ENST00000543872 ACAT1P24752 427 aaKnown RBP13□□□□□ -0.33
SMG8-202ENST00000543872 GABRB2P47870 512 aa13□□□□□ -0.33
SMG8-202ENST00000543872 CTBSQ01459 385 aa13□□□□□ -0.33
SMG8-202ENST00000543872 DMP1Q13316 513 aaPredicted RBP13□□□□□ -0.33
SMG8-202ENST00000543872 GRAPQ13588 217 aa13□□□□□ -0.33
SMG8-202ENST00000543872 CYP2A13Q16696 494 aa13□□□□□ -0.33
SMG8-202ENST00000543872 SIAH1Q8IUQ4 282 aa13□□□□□ -0.33
SMG8-202ENST00000543872 ZNF781Q8N8C0 355 aa13□□□□□ -0.33
SMG8-202ENST00000543872 GRAPLQ8TC17 118 aaPredicted RBP13□□□□□ -0.33
SMG8-202ENST00000543872 SREK1Q8WXA9 508 aaKnown RBP13□□□□□ -0.33
SMG8-202ENST00000543872 ATXN7L3BQ96GX2 97 aa13□□□□□ -0.33
SMG8-202ENST00000543872 CCDC17Q96LX7 622 aa13□□□□□ -0.33
SMG8-202ENST00000543872 SLC29A1Q99808 456 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms