RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 AXIN1O15169 862 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 ADAM23O75077 832 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 ABCB4P21439 1286 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 NTSR1P30989 418 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 HOXC13P31276 330 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 NSFP46459 744 aaKnown RBP16.86■□□□□ 0.29
CIT-212ENST00000543239 FANCCQ00597 558 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 CENPCQ03188 943 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 GEN1Q17RS7 908 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 FIGNQ5HY92 759 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 MS4A13Q5J8X5 152 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 EGFLAMQ63HQ2 1017 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 TMEM92Q6UXU6 159 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 RASSF3Q86WH2 238 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 UCMAQ8WVF2 138 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 PGAP3Q96FM1 320 aaPredicted RBP16.86■□□□□ 0.29
CIT-212ENST00000543239 PRICKLE1Q96MT3 831 aaPredicted RBP16.86■□□□□ 0.29
CIT-212ENST00000543239 EDEM3Q9BZQ6 932 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 NUCKS1Q9H1E3 243 aaKnown RBP16.86■□□□□ 0.29
CIT-212ENST00000543239 CLEC4EQ9ULY5 219 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 SMG5Q9UPR3 1016 aaKnown RBP16.86■□□□□ 0.29
CIT-212ENST00000543239 MYO15AQ9UKN7 3530 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 M0QYT0 321 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 HRO43593 1189 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 TBL1XO60907 577 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 ALDH1A2O94788 518 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 PXNP49023 591 aaPredicted RBP16.85■□□□□ 0.29
CIT-212ENST00000543239 SGSHP51688 502 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 GSCP56915 257 aaPredicted RBP16.85■□□□□ 0.29
CIT-212ENST00000543239 CLEC16AQ2KHT3 1053 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 SLC25A52Q3SY17 297 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 C2CD6Q53TS8 623 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 SDE2Q6IQ49 451 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 MMS22LQ6ZRQ5 1243 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 IRF2BP2Q7Z5L9 587 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 CHPFQ8IZ52 775 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.85■□□□□ 0.29
CIT-212ENST00000543239 WFIKKN2Q8TEU8 576 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 GAB3Q8WWW8 586 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 RNF34Q969K3 372 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 PCDHB18PQ96TA0 734 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 GABRG3Q99928 467 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 AGPAT1Q99943 283 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 TTYH3Q9C0H2 523 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 ZDHHC4Q9NPG8 344 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 XPO7Q9UIA9 1087 aaKnown RBP16.85■□□□□ 0.29
CIT-212ENST00000543239 TMEM59LQ9UK28 342 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 RAB23Q9ULC3 237 aa16.85■□□□□ 0.29
CIT-212ENST00000543239 SYNJ2BP-COX16A0A087WUM0 186 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 LRRC53A6NM62 1247 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 GOLGA8SH3BPF8 625 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 TIMM44O43615 452 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 F9P00740 461 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 HOXB2P14652 356 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 TACR2P21452 398 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 HLA-FP30511 346 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 FLT3P36888 993 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 SULT1E1P49888 294 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 UBASH3AP57075 661 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 RNASE9P60153 205 aaKnown RBP16.84■□□□□ 0.29
CIT-212ENST00000543239 NME3Q13232 169 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 SIM2Q14190 667 aaPredicted RBP16.84■□□□□ 0.29
CIT-212ENST00000543239 BRMS1LQ5PSV4 323 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 OTUD1Q5VV17 481 aaPredicted RBP16.84■□□□□ 0.29
CIT-212ENST00000543239 ANO7Q6IWH7 933 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 KIAA0907Q7Z7F0 614 aaPredicted RBP16.84■□□□□ 0.29
CIT-212ENST00000543239 CHSY1Q86X52 802 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 PHF13Q86YI8 300 aaPredicted RBP16.84■□□□□ 0.29
CIT-212ENST00000543239 AHI1Q8N157 1196 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 SLC30A5Q8TAD4 765 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 RUBCNQ92622 972 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 IQCDQ96DY2 449 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 C11orf70Q9BRQ4 267 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 NUP58Q9BVL2 599 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 ELOVL2Q9NXB9 296 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 COX16Q9P0S2 106 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 THAP10Q9P2Z0 257 aaPredicted RBP16.84■□□□□ 0.29
CIT-212ENST00000543239 PAXBP1Q9Y5B6 917 aa16.84■□□□□ 0.29
CIT-212ENST00000543239 USP34Q70CQ2 3546 aa16.83■□□□□ 0.29
CIT-212ENST00000543239 FAM170AA1A519 330 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 F5H5T6 163 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 RPP40O75818 363 aaKnown RBP16.83■□□□□ 0.28
CIT-212ENST00000543239 CALB1P05937 261 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 PABPC1P11940 636 aaKnown RBP16.83■□□□□ 0.28
CIT-212ENST00000543239 PBX1P40424 430 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 CXCR3P49682 368 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 RPS24P62847 133 aaKnown RBP16.83■□□□□ 0.28
CIT-212ENST00000543239 PTP4A2Q12974 167 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 SRSF5Q13243 272 aaKnown RBP16.83■□□□□ 0.28
CIT-212ENST00000543239 ENPP2Q13822 863 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 NFKBIBQ15653 356 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 TTC39BQ5VTQ0 682 aaPredicted RBP16.83■□□□□ 0.28
CIT-212ENST00000543239 RAP1GAP2Q684P5 730 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 LAIR1Q6GTX8 287 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 PPP1R2P3Q6NXS1 205 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 LRSAM1Q6UWE0 723 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 CEP68Q76N32 757 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 SND1Q7KZF4 910 aaKnown RBP eCLIP16.83■□□□□ 0.28
CIT-212ENST00000543239 MFN1Q8IWA4 741 aa16.83■□□□□ 0.28
CIT-212ENST00000543239 CCDC117Q8IWD4 279 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms