RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 TUBA3CQ13748 450 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 IER5Q5VY09 327 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 DCP1BQ8IZD4 617 aaKnown RBP19.8■□□□□ 0.76
HDAC4-215ENST00000543185 NEDD1Q8NHV4 660 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 ZNF671Q8TAW3 534 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 HDAC7Q8WUI4 952 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 SHCBP1LQ9BZQ2 653 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 ARHGAP28Q9P2N2 729 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 TBX20Q9UMR3 447 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 BCS1LQ9Y276 419 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 DYRK1BQ9Y463 629 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 ZNF24P17028 368 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 PON1P27169 355 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 DENND5BQ6ZUT9 1274 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 REXO1L1PQ8IX06 675 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 RNASE11Q8TAA1 199 aaKnown RBP19.8■□□□□ 0.76
HDAC4-215ENST00000543185 GPRC5DQ9NZD1 345 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 DSEQ9UL01 958 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 PIN4Q9Y237 131 aaKnown RBP19.8■□□□□ 0.76
HDAC4-215ENST00000543185 RIPK2O43353 540 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 FARP2O94887 1054 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-215ENST00000543185 ATP6V0D2Q8N8Y2 350 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 RAPGEFL1Q9UHV5 662 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 ADSSP30520 456 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 HSF2Q03933 536 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 ALFQ53S48 1182 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 SLFN11Q7Z7L1 901 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 ZNF554Q86TJ5 538 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 ZKSCAN4Q969J2 545 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-215ENST00000543185 ORAI2Q96SN7 254 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 GTF2A1LQ9UNN4 478 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 NFICP08651 508 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 VAV1P15498 845 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 NEK3P51956 506 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 CDC42P60953 191 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 INTS11Q5TA45 600 aaKnown RBP19.8■□□□□ 0.76
HDAC4-215ENST00000543185 PTCD3Q96EY7 689 aaKnown RBP19.8■□□□□ 0.76
HDAC4-215ENST00000543185 DBNDD1Q9H9R9 158 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 CHORDC1Q9UHD1 332 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-215ENST00000543185 NR6A1Q15406 480 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 GTF2E2P29084 291 aaKnown RBP19.79■□□□□ 0.76
HDAC4-215ENST00000543185 ZNF844Q08AG5 666 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 CDH18Q13634 790 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 RIPOR1Q6ZS17 1223 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 FAM126BQ8IXS8 530 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 RERGLQ9H628 205 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 PFDN2Q9UHV9 154 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 ERGIC3Q9Y282 383 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 APBA3O96018 575 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 BAG6P46379 1132 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 BCAT1P54687 386 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 FAM187BQ17R55 369 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 TCEAL5Q5H9L2 206 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 TTC30AQ86WT1 665 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 CLN6Q9NWW5 311 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 STK4Q13043 487 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 KLF6Q99612 283 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-215ENST00000543185 A0A0X1KG70 313 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 HLA-DRAP01903 254 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 MFSD14CQ5VZR4 134 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 OTUD5Q96G74 571 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 CLK4Q9HAZ1 481 aaKnown RBP19.79■□□□□ 0.76
HDAC4-215ENST00000543185 KCND1Q9NSA2 647 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 PPP1R3GB7ZBB8 358 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 RPN2P04844 631 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 MZF1P28698 734 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-215ENST00000543185 ATN1P54259 1190 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-215ENST00000543185 DHDDSQ86SQ9 333 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 RIT2Q99578 217 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 WDCPQ9H6R7 721 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 JMJD4Q9H9V9 463 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 ATMINO43313 823 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-215ENST00000543185 CYP11B1P15538 503 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 ALDH5A1P51649 535 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-215ENST00000543185 PACS2Q86VP3 889 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 PDPRQ8NCN5 879 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 CHST12Q9NRB3 414 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 SMIM22K7EJ46 135 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 SMIM11AP58511 58 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 DPYSQ14117 519 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 ARCQ7LC44 396 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 RNF145Q96MT1 663 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 TBCBQ99426 244 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 RIBC2Q9H4K1 309 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 SH3BP1Q9Y3L3 701 aa19.79■□□□□ 0.76
HDAC4-215ENST00000543185 LOC100506127A0A0U1RQW1 187 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 FCHO1O14526 889 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 NMT2O60551 498 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 EPHB2P29323 1055 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 NMT1P30419 496 aaKnown RBP19.78■□□□□ 0.76
HDAC4-215ENST00000543185 SOX11P35716 441 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 ATF7IP2Q5U623 682 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 SFRP1Q8N474 314 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 DAGLBQ8NCG7 672 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 ERBB3P21860 1342 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 SMNDC1O75940 238 aaKnown RBP eCLIP19.78■□□□□ 0.76
HDAC4-215ENST00000543185 EPN2O95208 641 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 C1QBPQ07021 282 aaKnown RBP19.78■□□□□ 0.76
HDAC4-215ENST00000543185 UXS1Q8NBZ7 420 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 DSN1Q9H410 356 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms