RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 EPHB3P54753 998 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 DMTNQ08495 405 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 VARS2Q5ST30 1063 aaKnown RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 MARC1Q5VT66 337 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 C16orf46Q6P387 395 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 SYDE1Q6ZW31 735 aaPredicted RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 ZNF467Q7Z7K2 595 aaPredicted RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 LRRC34Q8IZ02 419 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 TMEM86AQ8N2M4 240 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 ATP13A1Q9HD20 1204 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 PDLIM7Q9NR12 457 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 TLL2Q9Y6L7 1015 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 H7C4K7 107 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 FSCN2O14926 492 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ZBTB24O43167 697 aaPredicted RBP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 HOXA2O43364 376 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 CHRNA1P02708 482 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 RHOCP08134 193 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 CTNNB1P35222 781 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 GDF10P55107 478 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 SEMG2Q02383 582 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 KBTBD12Q3ZCT8 623 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ECHDC2Q86YB7 292 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 FUKQ8N0W3 1084 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 SPATA6LQ8N4H0 392 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 CYP2S1Q96SQ9 504 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 VIPAS39Q9H9C1 493 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 GDF3Q9NR23 364 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 GKN1Q9NS71 199 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 TBC1D13Q9NVG8 400 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 MYH4Q9Y623 1939 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 COL4A5P29400 1685 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 A0A1W2PQ45 241 aaPredicted RBP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 A0A1W2PQY0 241 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 AGTP01019 485 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ITGB1P05556 798 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 IGFBP4P22692 258 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 IGFBP6P24592 240 aaPredicted RBP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 TRIM60Q495X7 471 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 AGMOQ6ZNB7 445 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ZCCHC23Q6ZST2 131 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 CRLF3Q8IUI8 442 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 KIF2BQ8N4N8 673 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ZNF558Q96NG5 402 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 EGFL8Q99944 293 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 TRIM62Q9BVG3 475 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 CINPQ9BW66 212 aaPredicted RBP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 PCDH9Q9HC56 1237 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 PTPRHQ9HD43 1115 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 LATS2Q9NRM7 1088 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ADAM28Q9UKQ2 775 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 SLC8A2Q9UPR5 921 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 IGKV6D-21A0A0A0MT36 114 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 NRP1O14786 923 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 TRIM66O15016 1216 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ASMTLO95671 621 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 CXCL14O95715 111 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 CHRM3P20309 590 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 SMAD3P84022 425 aaKnown RBP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 KDSRQ06136 332 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 LPIN1Q14693 890 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 EFTUD2Q15029 972 aaKnown RBP eCLIP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 CDCA2Q69YH5 1023 aaPredicted RBP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 SLAIN1Q8ND83 568 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 TTPALQ9BTX7 342 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 TRIM55Q9BYV6 548 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ABCG8Q9H221 673 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 FBXO44Q9H4M3 255 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 AAASQ9NRG9 546 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 MYH8P13535 1937 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 SDR42E2A6NKP2 422 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 TLL1O43897 1013 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 DNAJC6O75061 913 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 PIGRP01833 764 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 CCL5P13501 91 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ADRA1BP35368 520 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 PLK1P53350 603 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 GEMIN4P57678 1058 aaKnown RBP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 OCRLQ01968 901 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 POLD3Q15054 466 aaPredicted RBP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 TTMPQ5BVD1 217 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ANKRD20A2Q5SQ80 823 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ANKRD20A1Q5TYW2 823 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ANKRD22Q5VYY1 191 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 HS6ST3Q8IZP7 471 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 NUP93Q8N1F7 819 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 MSL3Q8N5Y2 521 aaKnown RBP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 PPHLN1Q8NEY8 458 aaKnown RBP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 MYCBPAPQ8TBZ2 947 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 CCDC124Q96CT7 223 aaKnown RBP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 TRIM56Q9BRZ2 755 aaKnown RBP10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ARHGEF38Q9NXL2 777 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 WHRNQ9P202 907 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 MFHAS1Q9Y4C4 1052 aa10.43□□□□□ -0.74
TOP3A-208ENST00000542570 ZBTB42B2RXF5 422 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 TXNDC9O14530 226 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 PFDN6O15212 129 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 PAGE1O75459 146 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 AMHP03971 560 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 SNRPAP09012 282 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms