RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 METTL3Q86U44 580 aaKnown RBP8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 LRRC49Q8IUZ0 686 aa8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 NAT16Q8N8M0 369 aa8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 TMEM161BQ8NDZ6 487 aa8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 UHMK1Q8TAS1 419 aaKnown RBP8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 ZNF274Q96GC6 653 aaPredicted RBP8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 FAM81BQ96LP2 452 aa8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 BAG1Q99933 345 aaPredicted RBP8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 RUSC1Q9BVN2 902 aa8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 RNF38Q9H0F5 515 aa8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 RPF1Q9H9Y2 349 aaKnown RBP8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 C17orf75Q9HAS0 396 aa8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 PDRG1Q9NUG6 133 aa8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 DEC1Q9P2X7 70 aa8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 TFIP11Q9UBB9 837 aaKnown RBP8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 EIF2B4Q9UI10 523 aaKnown RBP8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 CFAP45Q9UL16 551 aa8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 TP53BP1Q12888 1972 aaPredicted RBP8.13□□□□□ -1.11
NPIPB4-215ENST00000542133 BOD1L1Q8NFC6 3051 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 E2F8A0AVK6 867 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 ZNF840PA6NDX5 716 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 KCNJ18B7U540 433 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 CBX4O00257 560 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 ENC1O14682 589 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 TERTO14746 1132 aaKnown RBP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 PAPSS1O43252 624 aaPredicted RBP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 DTNBO60941 627 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 CDKL5O76039 1030 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 ECEL1O95672 775 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 OAS1P00973 400 aaKnown RBP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 RAC2P15153 192 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 ACAT1P24752 427 aaKnown RBP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 ADSSP30520 456 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 CCT6AP40227 531 aaKnown RBP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 UBA7P41226 1012 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 CSNK1EP49674 416 aaKnown RBP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 ACADVLP49748 655 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 AFF3P51826 1226 aaKnown RBP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 UBASH3AP57075 661 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 BPIFB3P59826 476 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 USP46P62068 366 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 IL9RQ01113 521 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 TMEM132DQ14C87 1099 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 KYAT1Q16773 422 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 BTBD8Q5XKL5 378 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 ISM2Q6H9L7 571 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 FBXL19Q6PCT2 694 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 SCN4BQ8IWT1 228 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 CD302Q8IX05 232 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 OR8H2Q8N162 312 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 ZNF248Q8NDW4 579 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 SPIRE2Q8WWL2 714 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 IGSF8Q969P0 613 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 NTPCRQ9BSD7 190 aaKnown RBP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 C2orf49Q9BVC5 232 aaPredicted RBP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 REPIN1Q9BWE0 567 aaKnown RBP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 DDX19AQ9NUU7 478 aaKnown RBP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 TRPM5Q9NZQ8 1165 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 TBC1D14Q9P2M4 693 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 ANKMY1Q9P2S6 941 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 DKK3Q9UBP4 350 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 KIAA1024Q9UPX6 916 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 DERAQ9Y315 318 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 N6AMT1Q9Y5N5 214 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 SNX5Q9Y5X3 404 aa8.12□□□□□ -1.11
NPIPB4-215ENST00000542133 RELNP78509 3460 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 USP9YO00507 2555 aaPredicted RBP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 SFI1A8K8P3 1242 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 KPNA7A9QM74 516 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 F8VZ95 297 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 H0Y8X5 98 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 KCNK3O14649 394 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 OGTO15294 1046 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 SKAP2O75563 359 aaPredicted RBP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 IGLV3-19P01714 112 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 C1SP09871 688 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 OR52Z1P0C646 297 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 CDK4P11802 303 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 GUCY2CP25092 1073 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 PSMA5P28066 241 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 CDC25AP30304 524 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 MCM7P33993 719 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 GRIK1P39086 918 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 PRPHP41219 470 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 MAGEA11P43364 429 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 GRIA4P48058 902 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 PPM1FP49593 454 aaPredicted RBP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 PCBP4P57723 403 aaKnown RBP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 DNAJC3Q13217 504 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 FUT11Q495W5 492 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 SV2CQ496J9 727 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 ARMC4Q5T2S8 1044 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 BROXQ5VW32 411 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 GRAMD4Q6IC98 578 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 LAYNQ6UX15 382 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 MMS22LQ6ZRQ5 1243 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 TRIM74Q86UV6 250 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms