RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 RGL1Q9NZL6 768 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 MAN2B2Q9Y2E5 1009 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 PCDHB2Q9Y5E7 798 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 ANO9A1A5B4 782 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 SLC22A23A1A5C7 686 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 INSIG1O15503 277 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 ZSCAN9O15535 394 aaPredicted RBP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 CTIFO43310 598 aaKnown RBP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 PIP5K1CO60331 668 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 TCEA3O75764 348 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 CD63P08962 238 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 NBPF7P0C2Y1 421 aaPredicted RBP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 CD53P19397 219 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 TNFRSF1BP20333 461 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 DRD1P21728 446 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 ME1P48163 572 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 LMOD3Q0VAK6 560 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 MAPKAPK3Q16644 382 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 WDR78Q5VTH9 848 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 CCDC144NLQ6NUI1 221 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 KYAT3Q6YP21 454 aaKnown RBP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 FAM57BQ71RH2 274 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 DPP9Q86TI2 863 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 CCDC150Q8NCX0 1101 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 ZNF548Q8NEK5 533 aaPredicted RBP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 VPS37AQ8NEZ2 397 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 PARD3BQ8TEW8 1205 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 ASB12Q8WXK4 309 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 AKAP1Q92667 903 aaKnown RBP eCLIP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 CELF1Q92879 486 aaKnown RBP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 TRMT61AQ96FX7 289 aaKnown RBP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 NAP1L5Q96NT1 182 aaPredicted RBP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 NAP1L4Q99733 375 aaKnown RBP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 ELAC2Q9BQ52 826 aaKnown RBP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 FOXP1Q9H334 677 aaPredicted RBP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 CDCP1Q9H5V8 836 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 MAP3K20Q9NYL2 800 aaKnown RBP4.12□□□□□ -1.75
LEMD3-204ENST00000542032 FNIP2Q9P278 1114 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 DTNAQ9Y4J8 743 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 HS3ST3B1Q9Y662 390 aa4.12□□□□□ -1.75
LEMD3-204ENST00000542032 A0A0G2JK05 382 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 FAM234BA2RU67 622 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 FAM90A10PA6NDY2 464 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 MYMKA6NI61 221 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 TTC34A8MYJ7 566 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 NCK2O43639 380 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 USP12O75317 370 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 SGPL1O95470 568 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 IDEP14735 1019 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 YY1P25490 414 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 POLGP54098 1239 aaPredicted RBP4.11□□□□□ -1.75
LEMD3-204ENST00000542032 SLC12A2P55011 1212 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 POU5F1BQ06416 359 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 NSUN2Q08J23 767 aaKnown RBP eCLIP4.11□□□□□ -1.75
LEMD3-204ENST00000542032 DMWDQ09019 674 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 SEMA3BQ13214 749 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 PICALMQ13492 652 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 FHL1Q13642 323 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 PMS2P11Q13670 270 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 RAPGEF1Q13905 1077 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 SLC35G1Q2M3R5 365 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 ARL13BQ3SXY8 428 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 ARHGAP15Q53QZ3 475 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 MSANTD2Q6P1R3 559 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 TOGARAM2Q6ZUX3 1019 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 SAMD14Q8IZD0 417 aaPredicted RBP4.11□□□□□ -1.75
LEMD3-204ENST00000542032 TMX4Q9H1E5 349 aaPredicted RBP4.11□□□□□ -1.75
LEMD3-204ENST00000542032 MOV10Q9HCE1 1003 aaKnown RBP4.11□□□□□ -1.75
LEMD3-204ENST00000542032 KCNK9Q9NPC2 374 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 NECTIN3Q9NQS3 549 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 ASNSD1Q9NWL6 643 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 LUZP4Q9P127 313 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 FBXO9Q9UK97 447 aaPredicted RBP4.11□□□□□ -1.75
LEMD3-204ENST00000542032 CA14Q9ULX7 337 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 PHTF1Q9UMS5 762 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 VPS4AQ9UN37 437 aa4.11□□□□□ -1.75
LEMD3-204ENST00000542032 HEMK1Q9Y5R4 338 aaPredicted RBP4.11□□□□□ -1.75
LEMD3-204ENST00000542032 TRBV5-3A0A0A0MS03 114 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 ZNF814B7Z6K7 855 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 RASA4BC9J798 803 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 RASA4O43374 803 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 OAZ2O95190 189 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 VIPP01282 170 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 MYL3P08590 195 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 PSG1P11464 419 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 HARSP12081 509 aaKnown RBP4.1□□□□□ -1.75
LEMD3-204ENST00000542032 ST6GAL1P15907 406 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 TNFSF4P23510 183 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 STAT6P42226 847 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 HALP42357 657 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 CPA2P48052 419 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 BFSP2Q13515 415 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 ELF2Q15723 593 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 FAM209BQ5JX69 171 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 C9orf47Q6ZRZ4 202 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 ZDHHC17Q8IUH5 632 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 MMP21Q8N119 569 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 PIGKQ92643 395 aa4.1□□□□□ -1.75
LEMD3-204ENST00000542032 MSI2Q96DH6 328 aaKnown RBP4.1□□□□□ -1.75
LEMD3-204ENST00000542032 EBF3Q9H4W6 596 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms