RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 NTRK2Q16620 822 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 ELOA3BQ3SY89 546 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 KRBOX4Q5JUW0 171 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 GLRA4Q5JXX5 417 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 MPP7Q5T2T1 576 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 LIPMQ5VYY2 423 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 FIP1L1Q6UN15 594 aaKnown RBP5.83□□□□□ -1.48
DDB1-219ENST00000541513 C22orf34Q6ZV56 151 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 PLPPR4Q7Z2D5 763 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.83□□□□□ -1.48
DDB1-219ENST00000541513 RSPH3Q86UC2 560 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 WFDC8Q8IUA0 241 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 CNTROBQ8N137 903 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 ANKRD35Q8N283 1001 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 C8orf58Q8NAV2 365 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 FLAD1Q8NFF5 587 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 ELOA3Q8NG57 546 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 NUDT8Q8WV74 236 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 CTNNBL1Q8WYA6 563 aaPredicted RBP5.83□□□□□ -1.48
DDB1-219ENST00000541513 CPT1BQ92523 772 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 NCSTNQ92542 709 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 SLC22A18Q96BI1 424 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 CYFIP2Q96F07 1278 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 SIPA1Q96FS4 1042 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 TMX3Q96JJ7 454 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 GSDMAQ96QA5 445 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 REXO4Q9GZR2 422 aaKnown RBP5.83□□□□□ -1.48
DDB1-219ENST00000541513 MTG2Q9H4K7 406 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 SMARCAD1Q9H4L7 1026 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 IL21RQ9HBE5 538 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 RXFP1Q9HBX9 757 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 RIC8BQ9NVN3 520 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 AKAP7Q9P0M2 348 aaPredicted RBP5.83□□□□□ -1.48
DDB1-219ENST00000541513 CORO1CQ9ULV4 474 aaPredicted RBP5.83□□□□□ -1.48
DDB1-219ENST00000541513 USP18Q9UMW8 372 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 CLDN16Q9Y5I7 305 aa5.83□□□□□ -1.48
DDB1-219ENST00000541513 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.83□□□□□ -1.48
DDB1-219ENST00000541513 RNF103-CHMP3A0A140T963 221 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 CLRN2A0PK11 232 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 A4D1N5 150 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 CCDC169A6NNP5 214 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 EFCAB8A8MWE9 144 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 RNF103O00237 685 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 F2RL2O00254 374 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 SCAMP1O15126 338 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 GRM6O15303 877 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 TGFB1I1O43294 461 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 TSC22D2O75157 780 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 TULP3O75386 442 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 IPO7O95373 1038 aaKnown RBP5.82□□□□□ -1.48
DDB1-219ENST00000541513 GCNT3O95395 438 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 MATN4O95460 622 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 GAAP10253 952 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 GZMAP12544 262 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 SERPINA4P29622 427 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 BMPR1AP36894 532 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 TXKP42681 527 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 ACAA2P42765 397 aaKnown RBP5.82□□□□□ -1.48
DDB1-219ENST00000541513 ASPAP45381 313 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 IFNAR2P48551 515 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 PIK3CGP48736 1102 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 LMAN1P49257 510 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 NRG3P56975 720 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 EXOSC9Q06265 439 aaKnown RBP5.82□□□□□ -1.48
DDB1-219ENST00000541513 SGCGQ13326 291 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 ITGA7Q13683 1181 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 KRT24Q2M2I5 525 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 TWISTNBQ3B726 338 aaPredicted RBP5.82□□□□□ -1.48
DDB1-219ENST00000541513 CAVIN1Q6NZI2 390 aaKnown RBP5.82□□□□□ -1.48
DDB1-219ENST00000541513 NCEH1Q6PIU2 408 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 LINC00696Q6ZRV3 163 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 DYMQ7RTS9 669 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 RABEPKQ7Z6M1 372 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 DNAAF5Q86Y56 855 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 IRF2BP1Q8IU81 584 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 FRMD1Q8N878 549 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 MRPL43Q8N983 215 aaKnown RBP5.82□□□□□ -1.48
DDB1-219ENST00000541513 GMCL1P1Q8NEA9 526 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 MNS1Q8NEH6 495 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 GIMAP7Q8NHV1 300 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 PIWIL2Q8TC59 973 aaKnown RBP5.82□□□□□ -1.48
DDB1-219ENST00000541513 PHOSPHO1Q8TCT1 267 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 UBASH3BQ8TF42 649 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 PRPF31Q8WWY3 499 aaKnown RBP5.82□□□□□ -1.48
DDB1-219ENST00000541513 MR1Q95460 341 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 RAB24Q969Q5 203 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 GTPBP3Q969Y2 492 aaKnown RBP5.82□□□□□ -1.48
DDB1-219ENST00000541513 FER1L6-AS2Q96M78 137 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 AGAP3Q96P47 875 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 FTOQ9C0B1 505 aaKnown RBP eCLIP5.82□□□□□ -1.48
DDB1-219ENST00000541513 MROH8Q9H579 483 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 VPS37BQ9H9H4 285 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 JPH1Q9HDC5 661 aaPredicted RBP5.82□□□□□ -1.48
DDB1-219ENST00000541513 IL1RAPL2Q9NP60 686 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 PFDN4Q9NQP4 134 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 SERINC1Q9NRX5 453 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 ZBTB40Q9NUA8 1239 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 AP5S1Q9NUS5 200 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 FAM105AQ9NUU6 356 aa5.82□□□□□ -1.48
DDB1-219ENST00000541513 KCNK4Q9NYG8 393 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms