RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 DDX43Q9NXZ2 648 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 APOBEC2Q9Y235 224 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 GINS2Q9Y248 185 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 INPP5FQ9Y2H2 1132 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 KLHL33A6NCF5 533 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 CFLARO15519 480 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 MAFGO15525 162 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 MAFO75444 373 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 ENDOD1O94919 500 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 GSTA2P09210 222 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 STAG3L1P0CL83 205 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 GOT1P17174 413 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 VCLP18206 1134 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 CRHR1P34998 444 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 INHBCP55103 352 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 TBL3Q12788 808 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 DNAL1Q4LDG9 190 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 TMEM198Q66K66 360 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 MPZL3Q6UWV2 235 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 TTC30AQ86WT1 665 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 KHSRPQ92945 711 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 AGAP2Q99490 1192 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 TMEM134Q9H6X4 195 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 RPF1Q9H9Y2 349 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 IRAK4Q9NWZ3 460 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 ANK1P16157 1881 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 CCDC160A6NGH7 325 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 PAPSS1O43252 624 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 MED7O43513 233 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 PLIN3O60664 434 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 LTFP02788 710 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 CHRNGP07510 517 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 TFDP2Q14188 446 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 TLR1Q15399 786 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 STILQ15468 1287 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 GLRA4Q5JXX5 417 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 TREML2Q5T2D2 321 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 MARK2Q7KZI7 788 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 WDR75Q8IWA0 830 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 HPDLQ96IR7 371 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 BCO2Q9BYV7 579 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 DPEP3Q9H4B8 488 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 NRDE2Q9H7Z3 1164 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 DDX18Q9NVP1 670 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 SYBUQ9NX95 663 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 MAP3K20Q9NYL2 800 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 UBAP1Q9NZ09 502 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 PDP2Q9P2J9 529 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 HEMK1Q9Y5R4 338 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 RLFQ13129 1914 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 MCM3APO60318 1980 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 NUP205Q92621 2012 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 H3BNX3 289 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 KCNK1O00180 336 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 VTNP04004 478 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 JUNP05412 331 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 LCP1P13796 627 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 AOC1P19801 751 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 MRPS22P82650 360 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 MED21Q13503 144 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 PACS1Q6VY07 963 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 FAM131BQ86XD5 332 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 GALNT4Q8N4A0 578 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 SPATA6LQ8N4H0 392 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 PPP2R3CQ969Q6 453 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZBED3Q96IU2 234 aaPredicted RBP10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 MRPL45Q9BRJ2 306 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 PNPLA8Q9NP80 782 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 ANKRD33BA6NCL7 494 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 SOWAHBA6NEL2 793 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 ENPEPQ07075 957 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 WASHC5Q12768 1159 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 PDK3Q15120 406 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 TMCO4Q5TGY1 634 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 IYDQ6PHW0 289 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 NCAPG2Q86XI2 1143 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZBTB8OSQ8IWT0 167 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 PNPLA1Q8N8W4 532 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 EZH1Q92800 747 aaPredicted RBP10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 CDHR1Q96JP9 859 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 NRBP2Q9NSY0 501 aa10.66□□□□□ -0.7
CDC42SE1-207ENST00000540998 PDGFRBP09619 1106 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 PSMB4P28070 264 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 L1CAMP32004 1257 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 FOLH1Q04609 750 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 ITGA7Q13683 1181 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 LGSNQ5TDP6 509 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 FKBP1CQ5VVH2 108 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 FAM91A1Q658Y4 838 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 IL31Q6EBC2 164 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 MICALL2Q8IY33 904 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 CXorf38Q8TB03 319 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 CNBD2Q96M20 576 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 LENG8Q96PV6 779 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 NR1H4Q96RI1 486 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 KCTD15Q96SI1 283 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 COG4Q9H9E3 785 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 PTPRHQ9HD43 1115 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 PICK1Q9NRD5 415 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms