RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ZNF274Q96GC6 653 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 EAF1Q96JC9 268 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 ZBTB45Q96K62 511 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 DRC1Q96MC2 740 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 SLC22A12Q96S37 553 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 NTPCRQ9BSD7 190 aaKnown RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 CCSER1Q9C0I3 900 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 ACBD3Q9H3P7 528 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 GAREM1Q9H706 876 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 C17orf75Q9HAS0 396 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 PRDM16Q9HAZ2 1276 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 POLD4Q9HCU8 107 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 TRPC7Q9HCX4 862 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 KMT5AQ9NQR1 393 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 ARHGEF4Q9NR80 690 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 TM7SF3Q9NS93 570 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 CALCOCO1Q9P1Z2 691 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 KCNG1Q9UIX4 513 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 MAGED2Q9UNF1 606 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 POLR3KQ9Y2Y1 108 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 SNX14Q9Y5W7 946 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 GOLGA4Q13439 2230 aaKnown RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 THADAQ6YHU6 1953 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 LRRK2Q5S007 2527 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 PDCD11Q14690 1871 aaKnown RBP4.92□□□□□ -1.62
SNHG1-214ENST00000540865 A0A1W2PQF6 199 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 ANO9A1A5B4 782 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 FAM149AA5PLN7 773 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 TBC1D3BA6NDS4 549 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 LACTBL1A8MY62 500 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 B8ZZF3 427 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 LEFTY2O00292 366 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 PLK4O00444 970 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 CYB561D2O14569 222 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 BPNT1O95861 308 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 CDK4P11802 303 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 HOXB2P14652 356 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 FSTP19883 344 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 NTSR1P30989 418 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 KRT2P35908 639 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 PI4KAP42356 2102 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 GRK6P43250 576 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 GPR15P49685 360 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 GUCY2FP51841 1108 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 ETF1P62495 437 aaKnown RBP4.92□□□□□ -1.62
SNHG1-214ENST00000540865 TSPY1Q01534 308 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 RHDQ02161 417 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 MESP2Q0VG99 397 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 STRN3Q13033 797 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 RESTQ13127 1097 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 TOB2Q14106 344 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-214ENST00000540865 SAFBQ15424 915 aaKnown RBP eCLIP4.92□□□□□ -1.62
SNHG1-214ENST00000540865 NKG7Q16617 165 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 DDR2Q16832 855 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 HLA-BQ31612 363 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 ZC2HC1CQ53FD0 456 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-214ENST00000540865 TAF1BQ53T94 588 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-214ENST00000540865 C9orf57Q5W0N0 161 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 HAUS3Q68CZ6 603 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 RHBDF2Q6PJF5 856 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 PAOXQ6QHF9 649 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 SEZ6L2Q6UXD5 910 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 FILIP1Q7Z7B0 1213 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 SFTPA1Q8IWL2 248 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 CD302Q8IX05 232 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 DAW1Q8N136 415 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 ZNF513Q8N8E2 541 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-214ENST00000540865 FAM181AQ8N9Y4 354 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 CADM4Q8NFZ8 388 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 LEO1Q8WVC0 666 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-214ENST00000540865 YIPF2Q9BWQ6 316 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 TMEM60Q9H2L4 133 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 BHMT2Q9H2M3 363 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 IL21RQ9HBE5 538 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 CD248Q9HCU0 757 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 BRMS1Q9HCU9 246 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 C1GALT1Q9NS00 363 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-214ENST00000540865 DERAQ9Y315 318 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 PCDH15Q96QU1 1955 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 NUP210Q8TEM1 1887 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-214ENST00000540865 ATG2BQ96BY7 2078 aa4.92□□□□□ -1.62
SNHG1-214ENST00000540865 PLXNB3Q9ULL4 1909 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 FLNCQ14315 2725 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 C2orf78A6NCI8 922 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 MEI4A8MW99 385 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 FANCGO15287 622 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 SLC16A4O15374 487 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 BCAT2O15382 392 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-214ENST00000540865 HOXC11O43248 304 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-214ENST00000540865 FAM189A1O60320 539 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 HIP1RO75146 1068 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 PGRP06401 933 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 C6P13671 934 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 JUPP14923 745 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 ERCC5P28715 1186 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-214ENST00000540865 CD6P30203 668 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 CDC25AP30304 524 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 SSTR4P31391 388 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 HNF1BP35680 557 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms