RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 ARL14EPQ8N8R7 260 aaPredicted RBP4.18□□□□□ -1.74
MDM2-227ENST00000540709 ASB5Q8WWX0 329 aa4.18□□□□□ -1.74
MDM2-227ENST00000540709 GJA10Q969M2 543 aa4.18□□□□□ -1.74
MDM2-227ENST00000540709 HTATIP2Q9BUP3 242 aa4.18□□□□□ -1.74
MDM2-227ENST00000540709 NAA15Q9BXJ9 866 aaKnown RBP4.18□□□□□ -1.74
MDM2-227ENST00000540709 STARD7Q9NQZ5 370 aa4.18□□□□□ -1.74
MDM2-227ENST00000540709 PAPOLBQ9NRJ5 636 aaKnown RBP4.18□□□□□ -1.74
MDM2-227ENST00000540709 ZBTB40Q9NUA8 1239 aa4.18□□□□□ -1.74
MDM2-227ENST00000540709 ZNF580Q9UK33 172 aa4.18□□□□□ -1.74
MDM2-227ENST00000540709 B3GNT3Q9Y2A9 372 aa4.18□□□□□ -1.74
MDM2-227ENST00000540709 M0QZQ0 153 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 NPC1O15118 1278 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 PRPF4O43172 522 aaKnown RBP eCLIP4.17□□□□□ -1.74
MDM2-227ENST00000540709 CTIFO43310 598 aaKnown RBP4.17□□□□□ -1.74
MDM2-227ENST00000540709 NBPF7P0C2Y1 421 aaPredicted RBP4.17□□□□□ -1.74
MDM2-227ENST00000540709 PEPDP12955 493 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 CCKBRP32239 447 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 SOX2P48431 317 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 ZNF84P51523 738 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 KRTAP10-9P60411 292 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 SRSF1Q07955 248 aaKnown RBP eCLIP4.17□□□□□ -1.74
MDM2-227ENST00000540709 NSUN2Q08J23 767 aaKnown RBP eCLIP4.17□□□□□ -1.74
MDM2-227ENST00000540709 CSHL1Q14406 222 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 SEMA3AQ14563 771 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 PTGR1Q14914 329 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 MAPKAPK3Q16644 382 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 NUGGCQ68CJ6 796 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 C16orf89Q6UX73 402 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 SKAP1Q86WV1 359 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 EME1Q96AY2 570 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 ZNF845Q96IR2 970 aaPredicted RBP4.17□□□□□ -1.74
MDM2-227ENST00000540709 THOC3Q96J01 351 aaKnown RBP4.17□□□□□ -1.74
MDM2-227ENST00000540709 HIPK2Q9H2X6 1198 aa4.17□□□□□ -1.74
MDM2-227ENST00000540709 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.17□□□□□ -1.74
MDM2-227ENST00000540709 TRBV5-3A0A0A0MS03 114 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.16□□□□□ -1.74
MDM2-227ENST00000540709 ZNF814B7Z6K7 855 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 NFATC1O95644 943 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 CBSLP0DN79 551 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 CBSP35520 551 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 DMWDQ09019 674 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 PGM5Q15124 567 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 DLGAP5Q15398 846 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 INPP5JQ15735 1006 aaPredicted RBP4.16□□□□□ -1.74
MDM2-227ENST00000540709 SMTNL2Q2TAL5 461 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 HMBOX1Q6NT76 420 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 C9orf47Q6ZRZ4 202 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 SLC22A17Q8WUG5 538 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 GLMPQ8WWB7 406 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 ASB12Q8WXK4 309 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 P2RY11Q96G91 374 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 RIPOR3Q96MK2 946 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 COLEC11Q9BWP8 271 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 GATA5Q9BWX5 397 aaPredicted RBP4.16□□□□□ -1.74
MDM2-227ENST00000540709 EIF2AQ9BY44 585 aaKnown RBP4.16□□□□□ -1.74
MDM2-227ENST00000540709 THSD1Q9NS62 852 aa4.16□□□□□ -1.74
MDM2-227ENST00000540709 H0YGN5 161 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 KIF3BO15066 747 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 TOMM40O96008 361 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 CHRNB1P11230 501 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 TRIM27P14373 513 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 TNFRSF1BP20333 461 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 EEF1GP26641 437 aaKnown RBP4.15□□□□□ -1.75
MDM2-227ENST00000540709 THBS3P49746 956 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 SLC37A1P57057 533 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 GPR162Q16538 588 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 SLC35G1Q2M3R5 365 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 KLHL22Q53GT1 634 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 C6orf10Q5SRN2 563 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 MSANTD2Q6P1R3 559 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 TRAPPC11Q7Z392 1133 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 LAS2Q8IYD9 372 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 FAM47BQ8NA70 645 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 SRFBP1Q8NEF9 429 aaKnown RBP4.15□□□□□ -1.75
MDM2-227ENST00000540709 PJA1Q8NG27 643 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 MCRS1Q96EZ8 462 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 CCDC136Q96JN2 1154 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 LYZL4Q96KX0 146 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 MARK4Q96L34 752 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 NUDT22Q9BRQ3 303 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 PIMREGQ9BSJ6 248 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 MRPL44Q9H9J2 332 aaKnown RBP4.15□□□□□ -1.75
MDM2-227ENST00000540709 CERS4Q9HA82 394 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 FSCN3Q9NQT6 498 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 AGO2Q9UKV8 859 aaKnown RBP4.15□□□□□ -1.75
MDM2-227ENST00000540709 PCDHA12Q9UN75 941 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 PCDHGB2Q9Y5G2 931 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 CNTNAP2Q9UHC6 1331 aa4.15□□□□□ -1.75
MDM2-227ENST00000540709 KIR2DS5A0A0G2JLQ3 304 aa4.14□□□□□ -1.75
MDM2-227ENST00000540709 FAM90A8PA6NJQ4 464 aa4.14□□□□□ -1.75
MDM2-227ENST00000540709 KIR2DS3K7RE56 304 aa4.14□□□□□ -1.75
MDM2-227ENST00000540709 M0QYT0 321 aa4.14□□□□□ -1.75
MDM2-227ENST00000540709 RHODO00212 210 aa4.14□□□□□ -1.75
MDM2-227ENST00000540709 PIP5K1BO14986 540 aa4.14□□□□□ -1.75
MDM2-227ENST00000540709 TAF5LO75529 589 aa4.14□□□□□ -1.75
MDM2-227ENST00000540709 FGF18O76093 207 aa4.14□□□□□ -1.75
MDM2-227ENST00000540709 EPN2O95208 641 aa4.14□□□□□ -1.75
MDM2-227ENST00000540709 KAT7O95251 611 aa4.14□□□□□ -1.75
MDM2-227ENST00000540709 CER1O95813 267 aa4.14□□□□□ -1.75
MDM2-227ENST00000540709 ITGA5P08648 1049 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms