RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 IGSF8Q969P0 613 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 TOE1Q96GM8 510 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 HIC2Q96JB3 615 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 MRGPRX1Q96LB2 322 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 PCMTD1Q96MG8 357 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 ZNF560Q96MR9 790 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 GPR174Q9BXC1 333 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 SRRTQ9BXP5 876 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 DPH1Q9BZG8 443 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 VRTNQ9H8Y1 702 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 TMLHEQ9NVH6 421 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 ABI2Q9NYB9 513 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 TMEM63CQ9P1W3 806 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 CTNND2Q9UQB3 1225 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 NBPF19A0A087WUL8 3843 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 MYO18AQ92614 2054 aaKnown RBP9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 DENND4CQ5VZ89 1909 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 BICDL2A1A5D9 508 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 CFAP99D6REC4 459 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 LEFTY2O00292 366 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 SLC16A3O15427 465 aaKnown RBP9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 HUS1O60921 280 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 ATP2C2O75185 946 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 LDOC1O95751 146 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 HLA-DRAP01903 254 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 FAM163BP0C2L3 166 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 EPB41P11171 864 aaKnown RBP9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 ADH5P11766 374 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 KRT13P13646 458 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 CR2P20023 1033 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 ACAT1P24752 427 aaKnown RBP9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 OXTRP30559 389 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 ATICP31939 592 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 CSNK1EP49674 416 aaKnown RBP9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 CDH8P55286 799 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 RIPPLY3P57055 190 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 GAD2Q05329 585 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 KDSRQ06136 332 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 PAK1Q13153 545 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 ILKQ13418 452 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 BIRC3Q13489 604 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 TRPC3Q13507 836 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 TEAD4Q15561 434 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 NFE2Q16621 373 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 SGSM1Q2NKQ1 1148 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 KIF19Q2TAC6 998 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 DPCR1Q3MIW9 517 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 CBWD6Q4V339 395 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 CBWD3Q5JTY5 395 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 CBWD5Q5RIA9 395 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 SPOPLQ6IQ16 392 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 C12orf40Q86WS4 652 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 IRF2BP1Q8IU81 584 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 DHX40Q8IX18 779 aaKnown RBP9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 LSMEM2Q8N112 164 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 MLKLQ8NB16 471 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 SEMA4DQ92854 862 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 NAF1Q96HR8 494 aaKnown RBP9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 CEP63Q96MT8 703 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 PKMYT1Q99640 499 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 GABRG3Q99928 467 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 ACBD6Q9BR61 282 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 MRPL45Q9BRJ2 306 aaKnown RBP9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 SDCBP2Q9H190 292 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 MMRN2Q9H8L6 949 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 TMEM8AQ9HCN3 771 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 OSGEPQ9NPF4 335 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 ITM2CQ9NQX7 267 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 DDX43Q9NXZ2 648 aaKnown RBP9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 TBC1D14Q9P2M4 693 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 DEC1Q9P2X7 70 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 EIF2B4Q9UI10 523 aaKnown RBP9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 RWDD2AQ9UIY3 292 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 SNX11Q9Y5W9 270 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 FLNCQ14315 2725 aa9.33□□□□□ -0.92
TRAPPC1-202ENST00000540486 C2orf78A6NCI8 922 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 GFRA2O00451 464 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 SUV39H1O43463 412 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 TACC1O75410 805 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 MBD3O95983 291 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 ASS1P00966 412 aaKnown RBP9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 PDGFRBP09619 1106 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 WARSP23381 471 aaKnown RBP9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 GTF2H1P32780 548 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 WASP42768 502 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 MARSP56192 900 aaKnown RBP9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 CLDN6P56747 220 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 SLC7A9P82251 487 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 ZXDBP98169 803 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 CCDC142Q17RM4 750 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 BTBD8Q5XKL5 378 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 KRT39Q6A163 491 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 FAM171BQ6P995 826 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 CHPFQ8IZ52 775 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 ADGRF2Q8IZF7 708 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 TMEM86AQ8N2M4 240 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 TERB1Q8NA31 727 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 KCNE4Q8WWG9 221 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 TSC1Q92574 1164 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 SLC35C1Q96A29 364 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms