RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 GNA15P30679 374 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 ATN1P54259 1190 aaPredicted RBP11.36□□□□□ -0.59
PBX1-212ENST00000540236 ADGRE1Q14246 886 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 TAB1Q15750 504 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 COLEC12Q5KU26 742 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 ATAD3BQ5T9A4 648 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 TEDDM1Q5T9Z0 273 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 UGT2A3Q6UWM9 527 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 GK5Q6ZS86 529 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 APBA2Q99767 749 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 KIFC3Q9BVG8 833 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 CEP41Q9BYV8 373 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 NEK6Q9HC98 313 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 AVENQ9NQS1 362 aaPredicted RBP11.36□□□□□ -0.59
PBX1-212ENST00000540236 IARS2Q9NSE4 1012 aaKnown RBP11.36□□□□□ -0.59
PBX1-212ENST00000540236 CDC42BPGQ6DT37 1551 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 SYNCRIPO60506 623 aaKnown RBP11.36□□□□□ -0.59
PBX1-212ENST00000540236 PCNAP12004 261 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 FOSL2P15408 326 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 ITGAXP20702 1163 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 ME2P23368 584 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 KIZQ2M2Z5 673 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 KCNT2Q6UVM3 1135 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 CCDC149Q6ZUS6 474 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 PHC2Q8IXK0 858 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 SLC43A3Q8NBI5 491 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 OR7A2PQ8NGA2 310 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 ETNPPLQ8TBG4 499 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 EPB41L4BQ9H329 900 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 BRD7Q9NPI1 651 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 TOR4AQ9NXH8 423 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.36□□□□□ -0.59
PBX1-212ENST00000540236 PSMD13Q9UNM6 376 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 SLC8A2Q9UPR5 921 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 KLHL20Q9Y2M5 609 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 PRKAB1Q9Y478 270 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 ICMTO60725 284 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 RALBP11234 206 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 HLA-DPA1P20036 260 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 PSMA4P25789 261 aaKnown RBP11.36□□□□□ -0.59
PBX1-212ENST00000540236 DGKDQ16760 1214 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 ASTE1Q2TB18 679 aaPredicted RBP11.36□□□□□ -0.59
PBX1-212ENST00000540236 C16orf62Q7Z3J2 963 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 NLRX1Q86UT6 975 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 MAT2BQ9NZL9 334 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 EHD3Q9NZN3 535 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 BAZ2BQ9UIF8 2168 aaKnown RBP11.36□□□□□ -0.59
PBX1-212ENST00000540236 E5RJQ4 531 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 POLRMTO00411 1230 aaKnown RBP11.36□□□□□ -0.59
PBX1-212ENST00000540236 MED24O75448 989 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 MOGSQ13724 837 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 SLC15A2Q16348 729 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 COBLL1Q53SF7 1204 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 TERB1Q8NA31 727 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 FAR2Q96K12 515 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 FAM213AQ9BRX8 229 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 NAA50Q9GZZ1 169 aaKnown RBP11.36□□□□□ -0.59
PBX1-212ENST00000540236 C9JVG2 144 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 SEMA3AQ14563 771 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 CCDC58Q4VC31 144 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 AGKQ53H12 422 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 ARMC4Q5T2S8 1044 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 NSUN6Q8TEA1 469 aaKnown RBP11.35□□□□□ -0.59
PBX1-212ENST00000540236 LRRC15Q8TF66 581 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 KBTBD7Q8WVZ9 684 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 MTERF3Q96E29 417 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 MOCOSQ96EN8 888 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 SLC17A6Q9P2U8 582 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 MAD2L2Q9UI95 211 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 GNPTGQ9UJJ9 305 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 PCDHA1Q9Y5I3 950 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 USP17L10C9JJH3 530 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 TPP1O14773 563 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 PRPF4O43172 522 aaKnown RBP eCLIP11.35□□□□□ -0.59
PBX1-212ENST00000540236 RHOBTB1O94844 696 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 H6PDO95479 791 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 CYP4B1P13584 511 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 CKMT2P17540 419 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 AKIRIN2Q53H80 203 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 WDR78Q5VTH9 848 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 TBC1D21Q8IYX1 336 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 SLC7A3Q8WY07 619 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 NAP1L4Q99733 375 aaKnown RBP11.35□□□□□ -0.59
PBX1-212ENST00000540236 NXF1Q9UBU9 619 aaKnown RBP11.35□□□□□ -0.59
PBX1-212ENST00000540236 SERPINB13Q9UIV8 391 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 ANKRD34BA5PLL1 514 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 KPNA7A9QM74 516 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 MEN1O00255 615 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 INPP4BO15327 924 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 RACK1P63244 317 aaKnown RBP11.35□□□□□ -0.59
PBX1-212ENST00000540236 SLC13A2Q13183 592 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 PDIA6Q15084 440 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 XKR9Q5GH70 373 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 DNAJC10Q8IXB1 793 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 ZBTB38Q8NAP3 1195 aaPredicted RBP11.35□□□□□ -0.59
PBX1-212ENST00000540236 FBXL13Q8NEE6 735 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 BHMTQ93088 406 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 ATP6V1HQ9UI12 483 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 MYH7P12883 1935 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 MYH10P35580 1976 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms